Protein

View in Explore
Genbank accession
AGR46199.1 [GenBank]
Protein name
tail fiber adhesin
RBP type
TSP
Evidence RBPdetect
Probability 0,81
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MPPLEKIMAVVGVPGWIGSSSVNETGQRWMSQAAGQLRLGVPCWMSQFAGRSREIIHTLGADHNFNGQWFRDRCFEAGSTPIVFNITGDLVSYSKDVPLFFMYGDTPNEYVQLNIHGVTMYGRGGNGGSNSPGSAGGHCIQNDIGGRLRINNGGAIAGGGGGGGGGYYSPFPRIRLTFGGGGGRPFGAPGGSINMQSGATGGTISSPGSGSVNIIYNGGNGGEVGSAGGRCNIRGQGSEYDGGAAGYAVIGSAPTWQNVGAIYGPRV
Physico‐chemical
properties
protein length:267 AA
molecular weight: 27245,96200 Da
isoelectric point:8,73245
aromaticity:0,09363
hydropathy:-0,21685

Domains

Domains [InterPro]
IPR048291
8–49
IPR048291 IPR007932
AGR46199.1
1 267
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage PST
[NCBI] 		1351740 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia pseudotuberculosis
[NCBI] 		633 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Yersinia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGR46199.1 [NCBI]
Genbank nucleotide accession
KF208315.1 [NCBI]
CDS location
range 157638 -> 158441
strand +
CDS
ATGCCCCCTTTGGAGAAAATTATGGCAGTAGTTGGTGTTCCTGGTTGGATTGGTAGTTCATCCGTAAATGAAACAGGACAACGATGGATGAGTCAAGCAGCTGGTCAATTAAGATTAGGTGTTCCTTGCTGGATGAGTCAATTTGCAGGTCGCTCAAGAGAAATTATTCATACACTTGGAGCAGACCATAACTTCAATGGTCAATGGTTCCGAGATAGGTGTTTTGAGGCAGGTAGTACACCTATAGTGTTTAATATCACTGGAGATTTAGTATCATATTCTAAAGATGTTCCTTTATTCTTCATGTACGGAGATACACCAAATGAATATGTTCAGTTAAATATACATGGCGTAACGATGTATGGTCGTGGAGGTAATGGCGGTAGCAATAGTCCTGGCTCAGCTGGGGGTCATTGTATTCAAAACGATATTGGTGGGAGACTAAGAATTAATAATGGCGGAGCTATTGCAGGCGGTGGCGGCGGTGGCGGCGGCGGATATTATTCTCCTTTTCCACGAATAAGATTGACCTTTGGCGGCGGGGGCGGTCGTCCTTTTGGTGCGCCAGGCGGATCTATTAATATGCAATCAGGCGCGACTGGTGGTACTATTTCTTCACCTGGCTCAGGATCCGTGAATATTATCTATAATGGTGGAAACGGTGGTGAAGTAGGTTCCGCGGGAGGTAGATGCAATATTCGCGGTCAAGGATCTGAATATGATGGCGGTGCTGCTGGTTATGCTGTCATAGGGTCCGCTCCAACATGGCAAAATGTTGGAGCAATATATGGTCCAAGAGTATAA

Tertiary structure

PDB ID
5f5f9211ef028b655d15e9047abd7cb1c6e487af81719a9daa092beac5738a0a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8755
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Composite promoter-terminator motifs that mediate modular shuffling (PeSLs) are conserved among T4-like myoviruses infecting differing hosts Comeau,A.M., Arbiol,C. and Krisch,H.M. 2014-06-19 — GenBank