Protein

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Genbank accession
ABD72263.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,69
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MEVLRMAIVNIDLDTPRPDGKPGDDARVAFGKVNGNFADVQSQITAEVSARQSAISAVQTTVAAKASSSDLAAEISARQSADNAISATVTAQGQAINQRALSTDLTAEATARQAADASIQATLQAADASIQATLQAADASIQATLQAADTALGARIDDVLSMVGRNRLLNPGFTRASRGPGGTFSNFTTEFYTADQWVISGVSMSGSWGRNQLNGASNTLAAGRNYFAVNITSANLASVGQKIEGVHTLAGSKATLSVWLRSTVAGKRLGFRIYQSFGTGGSPSAAVSTIITPTPLTLSTTWQKYTLTFDVPSVSGKTIGTNNNDHLYVVFDITNTDSYGGALSGQTGQIELAYPQLEKGSVATEFEFRAPGVEKALCEWYLKAGVVALRGNGTGSAGAGTFISHEMRAAPAITFANTIYYYNCSGINYASYPTGVEVLVNATGTFAFYSTYIMSAEL
Physico‐chemical
properties
protein length:458 AA
molecular weight: 47858,73070 Da
isoelectric point:5,52688
aromaticity:0,08079
hydropathy:-0,02031

Domains

Domains [InterPro]
G3DSA:2.60.120.260
185–346
G3DSA:2.60.120.260
IPR008979
206–312
IPR008979
ABD72263.1
1 458
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage Xo411
[NCBI] 		375282 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ABD72263.1 [NCBI]
Genbank nucleotide accession
DQ408365 [NCBI]
CDS location
range 34 -> 1410
strand +
CDS
ATGGAGGTTTTAAGAATGGCAATTGTTAACATCGACTTAGATACACCTCGTCCAGATGGAAAACCTGGGGACGACGCCCGTGTGGCATTTGGAAAGGTGAACGGGAACTTCGCGGACGTCCAATCCCAGATCACTGCCGAAGTGTCTGCTAGGCAGTCGGCGATATCTGCTGTGCAGACCACCGTGGCAGCAAAGGCATCATCCTCTGATCTAGCGGCAGAGATTTCGGCACGGCAGAGTGCGGACAACGCTATCTCCGCTACGGTCACAGCTCAAGGACAGGCCATCAACCAGCGTGCGCTTAGCACAGATTTGACGGCAGAGGCAACAGCAAGGCAGGCCGCAGACGCGTCAATACAGGCGACACTACAGGCCGCAGACGCGTCAATACAGGCGACACTACAGGCCGCAGACGCGTCAATACAGGCGACACTACAGGCCGCAGACACTGCTCTAGGCGCACGAATTGACGATGTGCTGAGCATGGTGGGTCGGAACAGGCTGCTCAACCCAGGATTTACTCGGGCGTCTCGTGGCCCAGGTGGCACCTTCAGCAATTTTACGACTGAGTTCTACACTGCCGATCAGTGGGTTATAAGTGGTGTTAGTATGTCCGGAAGCTGGGGAAGAAATCAACTAAACGGTGCAAGCAATACATTGGCAGCAGGCCGCAACTACTTTGCCGTGAATATCACTTCCGCCAACTTGGCATCTGTAGGACAAAAAATTGAAGGTGTGCACACTCTCGCGGGCAGCAAGGCAACGCTTAGTGTATGGCTGCGCTCTACCGTGGCAGGCAAGAGATTAGGTTTCAGAATCTACCAATCCTTCGGCACAGGTGGTAGCCCTTCTGCGGCTGTTTCGACGATTATCACACCAACGCCCCTTACGTTGTCCACGACCTGGCAAAAGTATACGCTAACATTTGATGTGCCTTCCGTATCGGGTAAGACCATTGGAACAAACAACAATGACCACCTGTACGTGGTGTTTGACATTACAAATACCGATAGCTATGGCGGTGCATTATCTGGCCAGACTGGTCAAATTGAGTTAGCATATCCGCAGCTGGAAAAGGGATCTGTTGCGACCGAGTTTGAGTTCCGCGCACCCGGCGTAGAGAAGGCACTGTGCGAGTGGTATTTAAAGGCTGGGGTTGTTGCTTTGCGTGGAAACGGGACAGGGAGTGCTGGTGCAGGTACATTTATTTCGCACGAGATGCGTGCAGCACCTGCGATCACATTTGCTAACACAATCTACTATTACAACTGCTCTGGTATCAACTACGCATCGTATCCCACTGGCGTGGAGGTGTTGGTTAATGCTACAGGGACTTTTGCATTTTATTCGACATACATTATGTCGGCGGAGCTATAA

Tertiary structure

PDB ID
8c3da740e0e9de42a850e5b34eb29994d8b635ea5a4f22e8b55c97d2ce3ebb84
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8695
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A novel lysozyme from Xanthomonas oryzae phage varphiXo411 active against Xanthomonas and Stenotrophomonas Lee,C.N., Lin,J.W., Chow,T.Y., Tseng,Y.H. and Weng,S.F. 2006 16908188 GenBank