Protein

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Genbank accession
WIK99978.1 [GenBank]
Protein name
receptor recognizing protein
RBP type
TSP
Evidence RBPdetect
Probability 0,63
TF
Evidence Phold
Probability 1,00
Protein sequence
MAVVGVPGWIGSSSVNETGQRWMSQAAGQLRLGVPCWMSQFAGRSREIIHTLGADHNFNGQWFRDRCFEAGSAPIVFNITGDLVSYSKDVPLFFMYGDTPNEYVQLNIHGVTMYGRGGNGGSNSPGSAGGHCIQNDIGGRLRINNGGAIAGGGGGGGGGYYSPFSQMRLTFGGGGGRPFGAPGGSIDMQSGATAGTISAPGSGSVNGIYNGGNGGEVGSAGGRCNIRGQGSEYNGGAAGYAVIGSAPTWQNVGAIYGPRV
Physico‐chemical
properties
protein length:260 AA
molecular weight: 26328,77300 Da
isoelectric point:8,39013
aromaticity:0,09615
hydropathy:-0,21500

Domains

Domains [InterPro]
IPR048291
1–42
IPR048291 IPR007932
WIK99978.1
1 260
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage GADU22
[NCBI] 		3050704 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WIK99978.1 [NCBI]
Genbank nucleotide accession
OQ944321 [NCBI]
CDS location
range 44280 -> 45062
strand +
CDS
ATGGCAGTAGTTGGTGTTCCTGGTTGGATTGGTAGTTCATCCGTAAATGAAACAGGACAACGATGGATGAGTCAAGCGGCTGGTCAATTAAGATTGGGTGTTCCTTGCTGGATGAGTCAATTTGCAGGTCGCTCACGAGAAATTATTCATACACTTGGAGCAGACCATAACTTCAATGGTCAATGGTTCCGAGATAGATGTTTTGAGGCCGGTAGTGCACCTATAGTGTTTAATATTACAGGTGATTTAGTATCATATTCTAAAGATGTTCCTTTATTCTTCATGTACGGGGATACACCAAATGAATATGTTCAGTTAAATATACATGGCGTAACGATGTATGGACGTGGCGGTAATGGTGGTAGCAATAGTCCTGGCTCAGCTGGAGGTCATTGTATTCAAAACGATATTGGTGGGAGACTAAGAATTAATAATGGTGGAGCTATTGCTGGCGGCGGTGGCGGCGGTGGCGGCGGATATTATTCTCCTTTTTCACAAATGAGATTAACCTTTGGCGGTGGTGGTGGGCGTCCGTTTGGTGCACCTGGCGGATCTATTGATATGCAATCAGGCGCAACTGCTGGTACTATTTCTGCACCTGGCTCAGGATCCGTGAATGGTATCTATAATGGTGGAAACGGTGGTGAAGTAGGTTCCGCGGGAGGTAGATGCAATATTCGCGGTCAAGGATCTGAATATAATGGCGGCGCTGCTGGTTATGCTGTCATAGGGTCTGCTCCAACGTGGCAAAATGTTGGAGCAATATATGGTCCAAGAGTATAA

Tertiary structure

PDB ID
428a45fde27b006253b2d5f5e4f68f20adb9d86bd4cf4e9e8f89f4804376c1f2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8865
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of Klebsiella phage GADU22 from urine sample of a patient with urinary tract infection Salih,H., Yilmaz,U.I., Karaynir,A., Basgoz,B.B., Bozdogan,B. and Hosbul,T. 2024-01-18 — GenBank