Protein

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Genbank accession
AVO24347.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MADLPEQPAGWPGIPMISTSDPVLGGQDGPANRQAAALVSRLQMVRDLLDAATAALATLSPQVDQQVQTVNALQASVSSVQTSVQTVSGVATAAQTAASVADAKAVAAQTAATAKAVRMDLGSVTVTYTASTALVAGARSIAVACTGAQVGDAIFVAATNAIPDGYAVGAAQCLVADTIRVSVIYPALSIGNSFSIALRVFALR
Physico‐chemical
properties
protein length:204 AA
molecular weight: 20352,93700 Da
isoelectric point:4,80422
aromaticity:0,03431
hydropathy:0,50147

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage XPV3
[NCBI] 		2099862 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVO24347.1 [NCBI]
Genbank nucleotide accession
MG944236 [NCBI]
CDS location
range 22474 -> 23088
strand -
CDS
ATGGCCGATCTTCCCGAACAACCTGCCGGCTGGCCCGGTATCCCGATGATATCGACGTCCGACCCGGTCCTAGGCGGTCAAGACGGCCCCGCCAATCGCCAGGCTGCGGCGCTGGTCTCGCGCTTACAGATGGTACGCGATCTCCTCGACGCCGCCACCGCCGCGCTGGCGACGTTGAGCCCGCAGGTCGACCAGCAAGTTCAGACGGTCAACGCGCTGCAAGCCTCTGTCAGCTCCGTGCAGACGTCCGTGCAGACGGTCAGTGGGGTTGCCACGGCGGCTCAGACCGCGGCCTCTGTGGCCGACGCTAAGGCCGTTGCCGCGCAAACGGCAGCCACGGCAAAGGCAGTCCGCATGGATCTGGGCTCGGTCACGGTCACTTACACGGCAAGCACCGCACTAGTGGCCGGCGCACGTTCGATTGCGGTGGCGTGCACCGGGGCTCAGGTCGGCGACGCGATCTTCGTGGCCGCGACCAACGCGATACCGGACGGCTACGCGGTCGGCGCGGCGCAATGTCTGGTCGCCGACACGATCCGCGTATCGGTGATCTACCCTGCGCTGAGCATCGGCAATAGCTTCAGCATCGCGCTACGCGTGTTTGCGCTGCGGTAA

Tertiary structure

PDB ID
796c0eb6cad04ea8b4eb0d2f8f89a10acde019fbc90f5714dca23f3bd0de94c6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8641
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, characterization and comparative genomics of Xanthomonas oryzae pv. oryzae bacteriophages Varga,I., Molnar,J., Gazdag,A., Szucs,D., Doffkay,Z., Valappil,S.K., Papp,S., Pinter,R., Vera Cruz,C.M., Ricardo,O., Vizi,T., Schneider,G., Rakhely,G. and Kovacs,T. 2019-07-03 — GenBank