Protein

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Genbank accession
AAQ64416.1 [GenBank]
Protein name
gp12
RBP type
TF
Evidence RBPdetect
Probability 0,62
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MSGTNIFTHASDEAKYVYLQPFTSPGSAFEAGGDVQSILEQIDPSALLPLPPLPYATPTEDGAVEYSTQAEANALDDLLTVLTPETLDGVDQFVSPATDTQLGNLLELRSSDLTRTYASSDASRLLSYRRLEEMMTTRNALADDTTNESQGFAQFATLAESLAYNPSRIISPMRTWNLIKKEIPNPWAQATETSTGVVRTVAPSDSLKSDASIAISVKGLNHVSATTSKRGAFKLTQNNYDRNASDANEYAITPGTIDNLLATSDKVGFFQLPATFTNDSTQATSAALGYELANKLGPDGGTITGTLQCDNIYSNIVTRQKQYSYGGSYYVNVRETREVFPNNQLDAKIGLAGRPVGSIFHCTENVDPNVVFGGVWYRIRAGQTMIGQGTGDDGVRRRYFSAGTYRDDDRVTLYERHLPSHSHKSWGETYSGSKSACVKYGTYRNPYGVTYYCKEYSYVDYWRFGKSGSRNNIGMGSTDRDNYMYYTSPVGGGQAHENMMPFYPVYIWRRVK
Physico‐chemical
properties
protein length:512 AA
molecular weight: 56436,81150 Da
isoelectric point:5,42087
aromaticity:0,10742
hydropathy:-0,49844

Domains

Domains [InterPro]
IPR053827
355–511
IPR053827
AAQ64416.1
1 512
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage KVP40
[NCBI] 		75320 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio
[NCBI] 		662 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae >
Host Vibrio parahaemolyticus
[NCBI] 		670 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAQ64416.1 [NCBI]
Genbank nucleotide accession
AY283928.2 [NCBI]
CDS location
range 206950 -> 208488
strand +
CDS
ATGTCAGGAACAAACATATTCACGCACGCGAGTGACGAGGCAAAATATGTTTACCTGCAACCGTTCACTTCTCCCGGTTCAGCTTTTGAAGCGGGAGGAGATGTTCAGAGTATTTTGGAGCAAATTGATCCAAGCGCATTGCTACCACTGCCGCCGTTACCTTATGCAACTCCGACTGAGGACGGTGCAGTTGAGTACTCGACTCAAGCAGAAGCTAATGCACTTGATGATTTATTGACTGTTCTTACACCCGAAACATTAGACGGTGTTGATCAGTTTGTATCACCAGCAACCGATACTCAGCTAGGTAACTTACTTGAATTACGTTCAAGTGATTTGACTCGAACATATGCATCGTCAGATGCTAGTCGTTTGCTTTCATATCGTCGTCTTGAAGAAATGATGACGACTAGAAATGCACTTGCCGATGACACAACTAATGAATCTCAGGGGTTTGCTCAGTTTGCAACTCTAGCTGAATCATTAGCATACAACCCATCACGCATAATCTCGCCTATGCGAACGTGGAACTTGATTAAAAAAGAAATTCCAAACCCGTGGGCGCAAGCAACCGAGACATCAACCGGTGTCGTTAGAACAGTAGCACCGAGTGATTCATTGAAATCAGATGCTTCTATCGCGATTAGTGTCAAAGGGTTGAATCATGTATCAGCAACAACTTCAAAGCGAGGTGCGTTTAAGTTAACACAAAACAACTATGATCGCAATGCAAGTGATGCAAACGAATATGCAATAACTCCCGGTACAATTGATAATTTATTGGCTACGAGTGATAAGGTCGGATTCTTTCAACTCCCTGCTACGTTCACAAACGACTCAACTCAAGCAACTAGTGCGGCATTAGGCTACGAACTTGCAAATAAACTGGGTCCAGATGGTGGTACGATTACAGGTACGCTTCAATGTGACAACATTTACAGTAATATTGTTACGAGACAAAAGCAATACAGCTATGGCGGCTCATATTACGTTAATGTAAGAGAAACGCGAGAAGTATTCCCGAACAATCAACTTGACGCTAAAATCGGCTTAGCAGGTCGACCAGTCGGGAGCATTTTCCATTGTACCGAAAATGTAGACCCGAATGTTGTATTTGGGGGCGTGTGGTATAGAATCAGAGCAGGTCAAACAATGATTGGTCAAGGCACGGGCGACGATGGCGTGCGTCGTCGTTACTTCTCGGCAGGGACATATCGCGATGACGACCGAGTTACATTGTACGAGCGCCATTTGCCTAGTCATAGTCACAAAAGCTGGGGTGAAACATACTCGGGTTCTAAATCTGCATGTGTTAAGTACGGTACATATCGAAACCCGTATGGCGTGACGTATTACTGTAAAGAATACAGCTACGTTGATTATTGGAGATTTGGTAAATCTGGCTCTCGCAATAATATAGGCATGGGTTCTACTGACCGAGATAATTACATGTATTACACATCACCGGTAGGTGGCGGTCAAGCTCATGAAAACATGATGCCATTCTATCCCGTTTATATTTGGAGACGAGTTAAATGA

Tertiary structure

PDB ID
af2eb2b80dafed1b36ead79803c77e048e6c3e7d718228cd2f78acf5899c5f3d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6063
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50