Protein

View in Explore
Genbank accession
YP_012792008.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
Protein sequence
MSEPLIGNKPNDNKIDVPSIKVKEPTSQAEFTAILEEASKAHAKPVQQKPTTEPVRTPVTTDSRSIDVPPVVPSSDVPSDVIDSIAGQREPGTYSPLVSPGEPLQQERPTLRLPVYPQQDFNTPSADVQPYQGQQVYSTADPLVFGNTVSDERFNHWVSEAQKQATQMRPTDMLSQAFRVPQLDPSVSGGFAPTSQNQPWWGSPEQTEGYYDKQTGRWVQLKRNDFNIFKGKFGEFGQGLIGGGMQLLNIPQAVVQGGIADAANIFGALGSGLDKSGGLFGAIMNPGKFAQAVGQTWQQNSPVSQGQAPLTDANPSGFFQQLRNNSYTVAGLSGRNTTGTNSRRDASGRVEPFGQLYEKPSTLALPGREGETTTLGLGITQGTNVRRERNTVDEVAIRAATALVPGISEAERQRRQQDYLSKDDQLGGVFRGLGVDIVTGGLGEKLLGGLVQGATRQTTRQAVREVVVTRKPLPEVPKLPPGRTASPTRRLPPAQGINNPAYQLPPANRGLRQAPEVLEVKPVEPRVIVTPPSGRDEFGRIIADDKPVVQQPDRLVKTQRTALPGTPERPTLPETTQPRPSVEPEPPIYVVSGDGSVQGTFRDGKPYRPIDLGEATFDKVNTTVRIKPEDVPTVEVEALTVPYTELPPSAFTVSDTRVFKRRVSRPDAVEVLTTDITGELRPKLEGTDPNAPRLNPSPDEELKIPFQAYDKQGVPLPELQRTPEQIINGMVDGVDSLFKEYEDVLKRAEDQRLLSPAREFTTADLTRKALPEGTSPKLLDELNAPGKPLPTLKAREPLPDLRKLDKASEDIIDQIAKGLVSLDDGLKKLNELDKAKETTDLLRQAGYVQTEPGVIQSQAAQVNQKVRKVVRATDKETPVVSPLLKAPEALKVVDAEVFSPQYSLADFAKLVTREQAGAVYNPNAMKRGERTVASLIEVGKRITLPDGTTLLPGDTKPSTVNTFAKLNRKIERALESAGVPMQDRTYYRQIFSRNGIPIPENLPDDLIIRVGKAKPDGTPETLAVSSKPKQDVTPTLPLSEDYGVAVMMTYRDGKLVPTDRQPMKVMPAVGERNWKPWVYQKDLPAELVSKSPEGLDLTVRRAEVETNIAQLSDEYQAAKVNLEAVSKELNNALTKLDKVPDAGGRTLLDDPVFTKQEQVVGNSTNWLVDGANDGSPMFHGTRVNDLDLAKADPVKGASRSELGTAIYLTKNVDEATAKAVADVNRHLPMLSGRSFGDGVVHETRIKPTAVIIKDTHLLDDDMKRIFLDAAESTYGFEHPKVVRALDKALNKEGVTIKQAYALLDKAVLKFTGDVVEKELLTTQRDIVSQLRMYGIDGVSSADTVAIYNPDVIKTVARTGIGEVEDTLEHAVARLNVDSLAASRNPESPFLKASHAESKVRTLSELQEIAERELKQAQERLVDEVNKLADIDNELEGLSLSERNKLRQEALDADKRTYESFKRELNKPNDTNCL
Physico‐chemical
properties
protein length:1473 AA
molecular weight: 161148,92850 Da
isoelectric point:5,51608
aromaticity:0,05092
hydropathy:-0,53686

Domains

Domains [InterPro]
Coil
1101–1135
Coil Coil
YP_012792008.1
1 1473
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Leptolyngbya phage LPP-2, strain SPI
[NCBI] 		2996053 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012792008.1 [NCBI]
Genbank nucleotide accession
NC_111529.1 [NCBI]
CDS location
range 20341 -> 24762
strand -
CDS
ATGAGTGAACCACTGATAGGGAACAAACCTAACGACAACAAGATAGATGTGCCTAGTATCAAAGTGAAAGAACCAACATCACAAGCAGAGTTCACAGCCATACTAGAGGAAGCGAGTAAAGCACATGCAAAACCAGTACAACAAAAGCCAACGACCGAGCCTGTACGCACACCTGTTACTACTGATAGCAGAAGTATCGATGTTCCTCCTGTTGTTCCAAGTAGTGACGTACCCTCAGATGTCATCGACAGTATCGCAGGACAACGAGAACCAGGTACTTACAGTCCGTTAGTCTCTCCTGGTGAACCGCTACAACAGGAACGTCCAACGCTACGACTACCTGTATACCCTCAACAGGACTTTAACACACCGTCAGCAGACGTACAGCCATACCAAGGACAACAAGTGTACAGTACTGCTGATCCCTTGGTGTTTGGTAACACTGTAAGTGATGAACGCTTTAACCACTGGGTGTCTGAAGCACAGAAGCAAGCCACCCAGATGCGACCTACAGATATGTTGTCTCAGGCGTTCCGTGTACCACAACTAGATCCTTCTGTGTCTGGTGGCTTTGCTCCAACATCACAGAACCAACCGTGGTGGGGTAGTCCAGAGCAGACCGAAGGTTACTACGACAAACAGACAGGACGTTGGGTACAGCTTAAACGAAACGACTTTAACATCTTCAAAGGTAAGTTTGGTGAGTTCGGACAAGGACTTATCGGTGGTGGTATGCAACTACTGAACATCCCACAAGCGGTAGTACAAGGTGGTATAGCTGATGCGGCTAACATCTTTGGTGCGTTAGGCAGTGGTCTAGATAAGTCTGGTGGACTCTTTGGGGCTATCATGAACCCTGGTAAGTTTGCTCAAGCTGTGGGACAAACATGGCAACAGAACTCACCAGTATCACAAGGACAAGCACCACTTACCGACGCTAACCCTAGTGGGTTTTTCCAACAACTACGCAACAACAGCTATACCGTAGCTGGTTTGTCTGGTCGTAACACAACAGGGACAAACAGTAGACGTGATGCTAGTGGTCGTGTAGAACCCTTTGGTCAGTTGTACGAGAAACCAAGCACACTAGCCTTACCTGGTCGTGAGGGTGAGACAACAACACTAGGGCTAGGTATCACACAAGGTACGAACGTACGACGAGAACGTAACACTGTAGATGAAGTAGCCATCAGAGCAGCTACCGCACTTGTACCAGGTATCAGTGAAGCTGAACGACAACGTAGACAACAAGACTACTTATCAAAAGACGATCAACTTGGTGGTGTCTTCCGTGGACTAGGTGTTGACATCGTAACTGGTGGTTTAGGTGAGAAGTTGTTAGGTGGTCTTGTTCAAGGTGCGACAAGACAGACAACACGTCAAGCTGTACGTGAAGTTGTCGTTACTCGTAAACCGTTACCAGAAGTACCTAAGCTTCCCCCTGGTCGTACAGCGTCACCAACTAGACGACTACCACCAGCACAAGGTATCAACAACCCTGCATACCAACTGCCACCAGCTAACCGAGGACTGAGACAAGCACCAGAGGTACTGGAGGTTAAACCAGTAGAACCACGGGTTATCGTTACGCCACCATCAGGACGTGACGAGTTTGGTCGTATCATCGCCGACGACAAACCAGTAGTACAACAACCAGACAGACTGGTGAAGACACAACGTACAGCACTCCCTGGGACACCTGAACGCCCTACGTTACCAGAGACTACACAGCCACGTCCTTCAGTAGAACCAGAACCACCTATCTATGTTGTGTCGGGTGATGGAAGTGTACAAGGTACGTTCCGTGATGGTAAGCCATACAGACCTATCGATCTAGGTGAAGCTACCTTTGATAAGGTAAACACTACTGTACGCATCAAACCAGAAGATGTACCTACTGTAGAGGTTGAGGCACTTACTGTACCTTATACCGAGCTTCCACCATCAGCGTTTACTGTGTCTGATACACGTGTGTTCAAGCGTCGTGTGTCTCGCCCTGACGCAGTAGAGGTACTGACTACAGACATCACAGGAGAGTTAAGACCCAAGCTGGAAGGCACTGACCCTAACGCACCAAGACTTAACCCAAGTCCTGATGAAGAGTTAAAGATACCCTTCCAAGCTTACGACAAACAAGGTGTTCCTCTTCCTGAACTACAACGCACACCTGAACAGATCATCAACGGTATGGTTGATGGTGTCGATAGCTTGTTCAAAGAGTACGAAGATGTACTTAAACGTGCTGAAGATCAACGCTTGTTGTCTCCTGCTCGTGAGTTCACGACTGCTGACTTAACACGCAAAGCTCTACCAGAAGGTACATCACCTAAGCTACTTGACGAACTCAACGCACCAGGTAAACCACTGCCTACACTTAAGGCACGTGAACCTCTGCCTGATCTACGTAAACTAGACAAAGCAAGTGAAGACATCATCGACCAGATAGCTAAAGGTCTAGTCAGTCTTGATGATGGTCTTAAGAAGCTGAACGAACTCGACAAGGCAAAAGAGACTACAGACTTGTTACGCCAAGCTGGTTATGTTCAAACAGAACCAGGTGTTATCCAAAGTCAAGCAGCACAGGTAAACCAAAAAGTACGTAAGGTGGTACGTGCGACAGACAAAGAGACACCTGTTGTGTCTCCCTTACTGAAAGCACCCGAAGCGCTGAAGGTCGTAGATGCTGAAGTGTTTAGCCCACAGTACTCACTCGCAGACTTTGCTAAGTTAGTCACTCGTGAACAAGCTGGTGCTGTCTACAACCCGAACGCTATGAAACGAGGAGAACGCACCGTAGCGTCTCTTATCGAGGTCGGTAAGCGTATCACACTACCAGACGGTACAACGCTGCTTCCTGGCGATACTAAGCCCAGTACAGTGAACACGTTCGCTAAGCTTAACCGCAAGATAGAACGAGCGCTTGAGTCTGCTGGTGTGCCTATGCAGGATAGAACATACTATCGTCAGATCTTTAGTCGTAACGGTATCCCGATCCCTGAGAACCTACCCGATGATCTTATCATCCGTGTGGGTAAAGCTAAACCTGACGGAACACCTGAGACACTAGCTGTCTCATCTAAGCCTAAGCAGGACGTAACACCTACGTTACCGTTGTCTGAGGACTACGGCGTGGCTGTGATGATGACATACAGAGACGGTAAGTTAGTCCCAACGGACAGACAACCTATGAAGGTCATGCCTGCTGTTGGAGAGCGTAACTGGAAACCTTGGGTGTATCAGAAAGACCTACCTGCTGAGCTTGTGTCTAAGTCTCCTGAAGGGTTAGACCTCACGGTTAGACGTGCTGAGGTTGAGACAAACATCGCTCAGTTATCTGATGAGTACCAAGCAGCTAAGGTTAACCTTGAAGCTGTAAGTAAGGAACTTAACAACGCACTTACCAAGCTTGACAAAGTACCTGATGCTGGTGGTCGTACCTTGTTAGATGACCCAGTGTTCACTAAACAAGAACAGGTTGTAGGTAACTCTACGAACTGGCTGGTTGATGGTGCTAACGATGGCTCACCTATGTTCCACGGTACACGAGTCAACGATCTAGACCTAGCGAAAGCTGACCCCGTTAAGGGTGCGTCTAGATCAGAACTAGGCACTGCTATCTACCTCACTAAGAACGTAGATGAGGCTACTGCTAAGGCTGTAGCTGACGTTAACAGACATCTACCTATGCTGTCTGGTCGGTCGTTCGGTGATGGTGTTGTACATGAGACACGTATCAAACCTACGGCTGTCATCATCAAAGACACACATCTACTAGATGACGACATGAAGCGTATCTTCCTTGACGCTGCTGAGTCTACCTATGGGTTCGAGCATCCGAAGGTTGTTCGTGCTTTAGATAAGGCACTGAACAAGGAAGGTGTCACCATCAAACAAGCATACGCGTTACTAGATAAAGCTGTACTCAAGTTCACTGGTGATGTCGTAGAGAAAGAACTGTTAACGACACAACGTGACATCGTAAGTCAACTACGTATGTACGGTATAGATGGTGTGTCCTCTGCTGACACAGTAGCTATCTATAACCCAGACGTTATCAAGACCGTTGCACGTACTGGTATCGGTGAGGTTGAAGACACACTAGAACATGCTGTAGCTCGTCTCAACGTAGACAGCCTAGCTGCTAGTCGTAACCCTGAGTCACCGTTCCTTAAGGCTTCACATGCTGAGTCTAAAGTACGTACGCTCAGTGAGCTACAAGAGATAGCAGAACGTGAGCTTAAGCAAGCACAAGAGCGTTTAGTAGATGAGGTTAACAAGCTTGCGGATATCGACAACGAACTAGAAGGTTTGTCGTTATCTGAACGCAACAAGCTACGACAGGAAGCACTAGACGCAGACAAACGTACATACGAAAGCTTCAAGCGTGAGCTAAACAAACCTAACGACACTAACTGTCTATAA

Tertiary structure

PDB ID
9d102e0035afd7206497d57976ef3eca9a0a27afc896243f10b2047d56962d5f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3524
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sequencing the genomes of LPP-1, the first isolated cyanophage, and its relative LPP-2 reveal different integration mechanisms in closely related phages Shaalan,H., Cattan-Tsaushu,E., Li,K. and Avrani,S. 2023 — GenBank