Protein

View in Explore
Genbank accession
AGH57797.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,84
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MARQGLLAQSKPLAATDTLLYSAPVDTSASAVLKIANDGTGSAYSVALRDYDQDLVLDSSSYLLHKGDIVTSYRVSIDTAVSVGSFTPGAQFVSSSGESTMKFESFYVPPLTTIYVKTTSIRVISLELIDTATGEFNVGDTVSKGVAPDNTDAVIYDVNGDFITIGPSTINGLGTEFVDGDAITSSSTASGTIAAGGISATENKFIFSETTVGGTYSRTVSDLFSDRVYRFDVSDTSMTGLLFALSETENGEWGPDGLAPTDPNDALDGGIEYTIGKTTNGTAGSGGAYVQYDMAANTSLPTSLFWYETDLTTAANASYGGGQDSFSTSSEVTYTEFYAYDLDGTWTNNVDSFEDNFITYTVEGQTSGPYGVVSDYTGTSLKIILGVGSAEFAGSNTFFDVPKSNTADRNTVTVSSVTTAKSTIAADSYLVDGNTNSANNTDTVTSLVVGPGQRVHVNSVTANNVFSLIGFEDGSSEYTTRVYGQT
Physico‐chemical
properties
protein length:486 AA
molecular weight: 50961,76480 Da
isoelectric point:4,05003
aromaticity:0,10082
hydropathy:-0,10741

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage KBS-M-1A
[NCBI] 		889950 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH57797.1 [NCBI]
Genbank nucleotide accession
JF974293 [NCBI]
CDS location
range 23215 -> 24675
strand -
CDS
ATGGCTAGACAAGGACTTCTCGCACAATCTAAACCACTAGCAGCAACAGATACTTTACTGTATTCTGCTCCTGTAGATACTTCGGCGTCGGCAGTTTTGAAGATTGCCAATGACGGTACTGGTTCTGCATATAGTGTTGCTCTCAGAGATTATGACCAAGACTTAGTTTTAGACTCTTCGAGTTATCTTTTGCATAAAGGTGACATCGTTACTTCGTATCGAGTCTCTATTGATACTGCTGTTAGCGTTGGTTCTTTTACACCAGGAGCTCAGTTTGTTAGTAGTAGCGGTGAATCTACTATGAAATTTGAGTCTTTCTATGTTCCACCTCTGACGACAATTTATGTAAAGACCACAAGTATTAGAGTTATTTCTCTAGAACTTATTGATACTGCAACTGGAGAATTCAACGTAGGAGACACGGTTAGTAAAGGAGTAGCACCAGATAATACTGATGCCGTTATTTACGATGTTAACGGTGACTTTATTACCATTGGACCATCTACTATTAATGGTCTTGGTACAGAATTTGTTGATGGTGATGCCATTACAAGTTCTTCTACTGCGAGTGGCACAATTGCTGCTGGTGGTATTTCTGCTACAGAAAATAAGTTTATCTTCTCCGAAACTACTGTTGGTGGTACATATAGTAGAACAGTCAGTGACTTGTTCAGTGATAGGGTATATCGTTTTGATGTTTCTGATACTTCCATGACAGGTTTACTCTTTGCATTATCAGAGACTGAAAATGGTGAGTGGGGTCCTGATGGTTTAGCACCTACTGACCCTAATGATGCTCTTGATGGTGGTATAGAATATACTATTGGAAAAACAACTAATGGAACTGCTGGTAGTGGCGGTGCATACGTTCAGTATGACATGGCAGCAAATACTTCTCTTCCCACTTCATTGTTCTGGTATGAAACTGATTTAACTACTGCTGCTAATGCTAGTTACGGTGGTGGTCAGGATTCATTTAGTACTTCTTCTGAAGTTACATACACCGAGTTTTATGCTTATGATTTAGATGGAACTTGGACTAACAACGTAGATAGTTTTGAAGATAACTTCATTACCTATACTGTTGAGGGGCAAACTTCTGGACCTTATGGTGTAGTCTCTGATTATACGGGAACATCATTGAAGATTATTCTTGGAGTTGGTTCTGCTGAGTTTGCTGGATCAAATACATTCTTTGACGTTCCTAAGAGTAACACTGCCGATAGAAACACTGTAACAGTATCTTCTGTAACTACTGCCAAGTCTACTATTGCCGCTGATAGTTATCTGGTTGATGGTAATACTAATTCTGCAAATAATACTGATACGGTTACTTCTTTAGTTGTTGGTCCTGGTCAAAGAGTTCATGTTAATAGCGTAACTGCAAACAATGTTTTCAGTTTGATTGGTTTTGAGGATGGCAGTTCCGAATACACAACTAGGGTGTACGGTCAGACCTAA

Tertiary structure

PDB ID
c039d99ea0209a6431f95068787c9a3a4847417321a4e5efc3b36bf1d8327c01
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3761
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage KBS-M-1A Henn,M.R., Lennon,J., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank