Protein

View in Explore
Genbank accession
AWY02959.1 [GenBank]
Protein name
DUF2479 domain-containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,78
TF
Evidence Phold
Probability 1,00
Protein sequence
MTINKNTNLEFSVQQNTEKGSVFTNFYTEDIGSASIRIRLSSDGYYINLTESDLKPSLFLFHEDGSIFEINEFVNVMPEKGLIQYNLADNVVRHAGRVNAKMFLKNSEKSVHVANFDFIIKDSGIAGAVEKEINVVVVEDTIRKIIEEESLELLGDGFKEEVLEEFKVYVVGNKEDFQGVQGEQGPPGPKGDKGDIGLTGPSGSQGPRGEQGIPGPQGATGPQGEQGLRGPQGIKGAQGDRGLQGEKGDQGIQGPKGDPGEIPNTTNWQKYKLTNDEGKYTELSLYNSDESLHGLSPGNFYATEVPINNASSTEGFVKVEKNASDLVTYITFKPTNSKEIWVKTFENDWSDWKDVSDNQKLTSIEKNIEPNFHNMNILNKIPLRFPGYDELVTSSGNTYYYPQGLALDENYLYVLYSPTGSGNTRRLVVMYDKLDNSIVTKFYAGSAGGESIHVEKEGNKTFLYAKTSAGSLGKFDISSIPVDMSELSPVQTFNIGLNYTFAKNGNEWIVEQDTPTRSAATTRELFAIYDSGLSKARRYFTVDPTVGGLWGMEYNYDTPKRQGMVALDGNLYQVSGGNYYIGNDYTTYRAQGVQLLSSNGHISKNYAYNPNELAGHLTEQGEKVTRIEHESGFVYNGKIYALVVYNFEVPNTNGADHRFCLVEYGSKTAEKTMGKSGEVIVSRNDDPYMPAIKGKLTNEYNGTPITTMKDLVKYMFNANRSEVLFYSSDVTMKDESDIDIPGGVTVRVTSAKIGIYWIEYMQNRQSRKVLLTYVGASGEYRVYNQNLEQSKSNVDLNTFLESANFYVTNSTNGPGGSAHGFVESRSTGTNAQQIFRPYNAATRYFRYYTGGAWSEWTII
Physico‐chemical
properties
protein length:859 AA
molecular weight: 95369,73020 Da
isoelectric point:5,09871
aromaticity:0,11059
hydropathy:-0,55180

Domains

Domains [InterPro]
IPR018913
5–145
IPR018913 IPR050149 cd19958
G3DSA:2.60.40.3350
5–125
G3DSA:2.60.40.3350 IPR008160
AWY02959.1
1 859
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage VB-SauS-SA2
[NCBI] 		2234082 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AWY02959.1 [NCBI]
Genbank nucleotide accession
MH356730 [NCBI]
CDS location
range 72516 -> 75095
strand +
CDS
ATGACAATTAACAAAAACACAAATTTAGAGTTTTCCGTGCAACAAAATACCGAAAAAGGTAGCGTGTTTACTAATTTCTACACAGAAGATATAGGAAGCGCCTCTATTCGAATAAGATTATCTAGTGATGGGTATTATATCAATTTGACAGAATCAGATTTAAAACCTTCACTGTTCTTATTCCATGAAGATGGCTCTATTTTTGAAATCAATGAGTTCGTAAATGTTATGCCTGAAAAAGGTTTAATACAATACAATTTAGCAGATAACGTTGTAAGACATGCTGGACGAGTTAATGCAAAAATGTTCTTGAAAAATTCTGAGAAATCTGTACATGTTGCCAATTTTGATTTCATTATTAAAGACAGTGGTATAGCTGGTGCAGTTGAAAAAGAAATAAATGTAGTCGTAGTAGAAGATACTATTAGAAAAATCATTGAAGAAGAATCGTTAGAGTTATTAGGCGATGGCTTTAAAGAAGAAGTATTAGAAGAGTTTAAAGTATATGTAGTTGGAAACAAAGAAGATTTCCAAGGTGTTCAAGGAGAACAGGGTCCTCCAGGACCAAAGGGAGATAAAGGTGATATTGGTCTTACAGGTCCTAGTGGTTCTCAAGGTCCTAGAGGGGAACAAGGAATACCTGGACCACAGGGTGCAACTGGACCACAAGGGGAGCAAGGTTTAAGAGGTCCTCAAGGGATTAAAGGAGCACAAGGAGATAGAGGTTTACAAGGTGAAAAAGGCGACCAAGGTATCCAAGGACCTAAAGGCGACCCTGGAGAAATACCTAATACAACTAATTGGCAAAAATATAAACTTACAAATGACGAAGGTAAATATACAGAGCTATCTTTATATAATAGCGATGAATCATTACACGGTTTATCACCTGGTAATTTTTATGCTACAGAAGTCCCTATTAATAATGCAAGTTCCACAGAAGGATTTGTCAAGGTTGAAAAGAACGCTAGTGATTTAGTAACTTACATCACTTTTAAACCAACCAACTCTAAAGAGATTTGGGTTAAAACTTTTGAAAATGATTGGTCTGATTGGAAAGATGTTTCTGATAATCAAAAATTAACTAGTATTGAGAAAAACATTGAACCTAATTTCCACAACATGAATATATTAAATAAAATACCATTAAGGTTCCCTGGTTACGATGAATTAGTTACATCAAGTGGAAACACATATTACTATCCACAAGGATTAGCTTTAGATGAAAACTATCTATATGTATTGTATAGTCCTACTGGTTCAGGTAATACAAGAAGACTTGTAGTAATGTATGATAAGTTAGATAACTCTATTGTAACTAAATTCTATGCAGGCTCAGCTGGAGGAGAAAGTATCCATGTAGAAAAAGAAGGAAATAAAACTTTCTTATATGCTAAAACAAGTGCAGGGTCTTTAGGTAAGTTTGATATATCTTCAATCCCTGTTGATATGAGTGAGCTAAGTCCTGTACAAACATTTAATATTGGTCTTAACTATACATTTGCTAAGAATGGTAATGAATGGATTGTGGAACAAGATACTCCAACAAGAAGCGCTGCAACAACTCGTGAATTATTTGCTATATATGACAGTGGTTTATCTAAAGCAAGAAGATACTTTACAGTAGACCCTACTGTTGGTGGTTTATGGGGTATGGAATATAATTATGATACTCCAAAACGTCAAGGGATGGTAGCTTTAGATGGTAACTTATATCAAGTATCAGGTGGTAACTATTATATAGGAAATGATTATACTACTTATAGAGCTCAAGGTGTTCAGTTACTATCTTCTAATGGACATATATCTAAGAACTATGCTTATAACCCAAATGAGCTAGCAGGACATCTTACAGAACAAGGAGAAAAAGTAACTCGTATTGAGCATGAAAGTGGATTCGTTTACAATGGTAAAATATATGCATTAGTAGTATACAACTTTGAAGTACCAAATACAAATGGTGCAGACCATAGATTCTGTTTGGTTGAATATGGTTCAAAAACTGCTGAGAAGACAATGGGCAAATCAGGAGAGGTAATCGTAAGTAGAAATGATGACCCTTATATGCCAGCTATTAAAGGTAAATTAACAAATGAATATAATGGAACTCCTATAACTACAATGAAAGATTTAGTTAAGTACATGTTTAATGCAAACCGCTCAGAAGTATTGTTCTACTCTTCAGATGTTACAATGAAAGATGAATCGGACATTGATATACCAGGAGGAGTTACAGTAAGAGTTACATCTGCTAAGATTGGTATATATTGGATTGAATACATGCAAAATAGACAAAGTAGAAAAGTGTTATTGACTTATGTAGGAGCTTCTGGAGAATACAGAGTATACAATCAAAACTTAGAGCAATCTAAATCAAATGTAGACCTAAACACTTTCTTAGAGTCAGCTAATTTTTATGTAACAAATAGTACAAATGGACCAGGTGGTTCAGCACATGGCTTTGTAGAATCAAGAAGCACAGGAACTAATGCACAACAAATATTCAGACCTTATAATGCAGCTACTAGATACTTTAGATATTACACTGGCGGAGCTTGGTCAGAATGGACTATAATATAA

Tertiary structure

PDB ID
22f4868cf1e28cbe7068a5ea11727cf019ab42c52063e9bfea7a9d1ed1dbb48a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6916
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of a novel Staphylococcus aureus phage sa2 Wang,J., Sun,H. and Ren,H. 2012-12-15 — GenBank