Protein

View in Explore
Genbank accession
YAO57453.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect2
Probability 0,79
TF
Evidence Phold
Probability 1,00
Protein sequence
MLLTIHDANLQKVGFIDNEKQETLNFYDDTWNRNLETASSTFEFTVSKKELLSDTANKPLYNQLNERSFVSFKYKGKTYLFNIMKTEENERWLRCYCENLNLELINEYTNAYKSDRPRSFAEYLDVFEIPQFAMVKIGVNEISDQKRTLEWEGQDTKLARLLSLANKFDAEVEFVTQLNDDSSIKQLVLNVYHKADDSHTGVGRIRGDIRLTFEKNIKSMTRKIDKTEVYTLVVPYGKSKESHEGDQEVRVYIDSLPPWEEKNDEGVVIFKQEGVNLYAPHAANLYPSTFGAATQDNKWIRKDLEVDSDDPNVIRAAGIANLRKHAYPAITYEVDGFLDVEVGDTVTIHDKGFTPALDIRARAVEQKISFSNPINNKTTFGNFKELEDRTSSDLRSVFERMVENSRPYTIMVSTNNGVLFKNNTGRSTISPTLKRGNQVVNATYRFVIDGSIVSSGLTYTVKASDITKPTVITISAWIDNKEVASEEVTFLNVSDGKQGPQGERGPQGPQGPQGPQGIQGLQGPKGDQGIPGPKGDDGKTQYIHIAYADTISGSGFSQTDTNKAFIGIYQDFNAIDSQNPQDYRWSKWKGSDGRDGIPGKAGADGRTPYVHFAYADSADGRTGFSLTQTGNKRYLGVLTNFVKEDSTNPADYKWSDMVGSVSVGGRNLLVKTNQGATNWYWGMSDGDVSVEEVNIDGIRAVKLIKGTKTANTGWNYIKYQGLLRKLIRPNTQYTLSFDVMPSVDVSFNAMLARGDWKEQLTDNIPMNKANANQWTKVSCVLTSKETLSGDLNQVVYLADMPTTNGNWLIIKNIKLEEGNIPTPWTPAIEDIQEEIDSKADDVLTQAQLNRLNETNSIIKAELAAKASLDVLDQWKQAYQDLVNSNAANRAQAEKDLADASARVVKLENILNDMSERWNFIDSYMTASNEGLVIGKKDNSSSWLFSPNGRISMLSAGNEVMYISKGVIHIENGIFSKTIQIGRYREEQDLLNPDRNVIRYVGGA
Physico‐chemical
properties
protein length:1003 AA
molecular weight: 112296,18260 Da
isoelectric point:5,28650
aromaticity:0,09073
hydropathy:-0,55055

Domains

Domains [InterPro]
IPR007119
57–245
IPR007119 PTHR24637 G3DSA:2.60.120.260 Coil
IPR010572
144–385
IPR010572 IPR008160
G3DSA:1.20.5.320
511–562
G3DSA:1.20.5.320
YAO57453.1
1 1003
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage ST2-2C
[NCBI] 		3464475 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAO57453.1 [NCBI]
Genbank nucleotide accession
PX283050.1 [NCBI]
CDS location
range 15697 -> 18708
strand +
CDS
ATGTTGCTAACAATTCACGACGCTAATTTACAAAAAGTTGGCTTTATCGATAACGAAAAGCAAGAAACACTAAATTTCTACGATGACACTTGGAATCGTAACCTTGAGACTGCTTCAAGTACATTCGAGTTTACCGTTTCAAAAAAAGAGCTGCTGAGCGATACAGCAAATAAGCCGCTTTACAATCAACTAAACGAGCGCTCTTTTGTTTCCTTCAAATATAAAGGCAAGACATATCTTTTTAACATCATGAAGACGGAAGAGAATGAGCGATGGTTACGATGTTATTGCGAAAACTTAAATCTCGAGCTGATAAATGAGTACACGAACGCATACAAGTCTGACAGGCCTAGGTCTTTCGCGGAATATCTTGATGTATTCGAAATTCCTCAGTTTGCGATGGTTAAAATAGGTGTTAATGAGATCTCTGATCAGAAGAGAACGCTCGAGTGGGAAGGGCAGGACACAAAACTGGCAAGGCTCTTAAGCTTGGCCAATAAATTTGACGCTGAAGTTGAATTTGTGACTCAACTTAACGATGACAGTTCAATTAAGCAACTCGTTTTGAACGTTTACCATAAAGCGGACGACTCGCACACTGGTGTGGGTCGGATTCGTGGCGATATTCGTCTTACATTTGAAAAAAATATCAAATCAATGACGAGAAAGATTGATAAGACTGAAGTCTATACGTTGGTAGTTCCTTATGGGAAATCAAAAGAGAGCCATGAAGGCGACCAGGAGGTACGTGTCTACATTGACAGCCTTCCGCCTTGGGAGGAAAAGAACGATGAAGGTGTTGTTATCTTCAAACAAGAAGGTGTCAACCTCTATGCACCTCATGCAGCCAACCTATACCCGTCTACTTTCGGCGCTGCCACTCAAGATAATAAGTGGATTCGAAAAGACTTAGAGGTTGATAGCGATGATCCAAACGTCATCCGTGCTGCAGGCATTGCAAACTTACGCAAACACGCATATCCAGCTATCACTTACGAGGTTGACGGGTTCCTCGATGTTGAGGTCGGGGATACCGTTACCATCCATGATAAGGGATTCACTCCAGCGCTTGACATAAGAGCGCGTGCCGTTGAGCAAAAAATCAGCTTCAGCAATCCAATCAACAATAAGACCACTTTCGGAAACTTCAAAGAGCTTGAAGATAGAACATCCTCAGACTTGAGAAGTGTCTTTGAGCGAATGGTTGAGAACAGTAGGCCGTACACTATCATGGTTTCAACCAATAACGGAGTTCTTTTTAAAAACAACACAGGGCGGTCAACCATAAGTCCAACGTTGAAAAGGGGTAATCAGGTTGTTAATGCAACCTATCGATTTGTGATCGATGGCTCTATTGTTAGCTCTGGTCTGACCTATACCGTCAAAGCAAGCGATATCACAAAACCAACTGTGATTACAATTTCCGCTTGGATAGATAATAAAGAAGTAGCTTCAGAAGAAGTTACTTTTTTAAATGTCTCAGACGGTAAACAAGGTCCACAAGGCGAACGTGGTCCTCAAGGACCTCAGGGACCTCAGGGACCTCAAGGTATTCAAGGCTTACAAGGTCCTAAGGGAGACCAAGGGATTCCTGGCCCTAAAGGAGATGATGGTAAAACTCAGTATATCCATATAGCTTACGCTGACACGATTTCTGGTAGCGGTTTTAGTCAAACTGATACTAACAAGGCTTTCATCGGTATATACCAAGACTTCAATGCTATTGATAGCCAAAACCCTCAAGACTATCGTTGGTCTAAGTGGAAAGGTAGTGATGGACGAGATGGTATTCCAGGAAAAGCTGGGGCAGACGGACGTACGCCTTACGTTCATTTTGCCTATGCCGATAGCGCCGATGGTAGAACTGGTTTCAGTTTGACCCAAACTGGTAATAAACGCTATTTAGGTGTGCTAACCAACTTCGTCAAAGAAGACAGCACAAACCCAGCAGATTATAAGTGGAGTGATATGGTTGGTAGCGTTTCAGTTGGGGGTAGAAACTTACTTGTAAAAACCAATCAAGGTGCTACAAATTGGTATTGGGGTATGTCAGATGGTGACGTGAGTGTTGAGGAAGTCAATATTGACGGAATTCGTGCTGTTAAATTAATCAAAGGTACAAAAACAGCAAATACTGGTTGGAACTACATTAAATATCAAGGTTTGTTGCGTAAACTCATACGACCAAACACACAGTACACTCTTTCATTCGATGTTATGCCAAGTGTTGATGTAAGTTTTAATGCAATGCTGGCAAGAGGTGACTGGAAAGAGCAGTTAACTGACAATATTCCTATGAATAAAGCTAATGCAAATCAGTGGACTAAAGTATCATGTGTTCTGACAAGTAAAGAAACTTTATCAGGTGATTTAAATCAAGTTGTCTACTTGGCAGATATGCCAACAACAAACGGTAATTGGTTAATAATCAAGAATATCAAGCTAGAAGAAGGTAATATACCTACTCCATGGACACCAGCCATCGAGGACATACAAGAAGAGATTGATTCCAAAGCCGATGATGTCCTAACACAAGCACAACTCAACAGACTGAACGAAACAAATTCTATTATTAAAGCTGAACTTGCTGCTAAAGCCTCACTTGATGTACTTGACCAGTGGAAGCAAGCCTATCAAGACCTCGTTAACTCAAACGCTGCCAATCGTGCACAAGCTGAAAAAGATTTAGCTGATGCAAGTGCACGAGTAGTGAAACTAGAAAATATCTTAAACGATATGTCAGAGCGTTGGAATTTTATTGATAGTTACATGACTGCATCAAACGAAGGACTTGTTATTGGTAAAAAAGATAATTCTAGCTCTTGGCTTTTCAGTCCTAACGGTCGTATCTCAATGCTTTCGGCTGGTAATGAAGTAATGTATATTTCTAAAGGTGTGATTCATATTGAAAATGGTATTTTCTCTAAAACTATCCAAATCGGACGATATCGAGAAGAACAAGATTTATTGAATCCAGACCGTAATGTCATAAGATATGTAGGAGGTGCTTAA

Tertiary structure

PDB ID
ea3088808f71a0938a62e9d60e6f791ca724f989de2d6f2e9651c228e463ca61
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8258
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Temporal dynamics of the S. thermophilus phage population in a yogurt production facility Pujato,S.A., Marangon,A.M., Rousseau,G., Tremblay,D., Moineau,S., Quiberoni,A. and Guglielmotti,D.M. 2018-03 — GenBank