Protein

View in Explore
Genbank accession
APD21560.1 [GenBank]
Protein name
PblB
RBP type
TF
Evidence RBPdetect2
Probability 0,78
Protein sequence
MLYLLNKDVRTVRWNGEPLHEATSAIVKETMNGDFTLTVKYPISDSGIYQLIQEDMLIKAPTPVLGAQLFRIKKPVEHNDHLEITAYHISDDVMQRSITQMSVTSQSCGMALSRMVQNTKTALGDFSFNSDIQDRRTFNTTETETLYSVLLDGKHSIAGTWEGELVRDNFAMTVKKSRGENRGVVITTHKNLKDYQRTKNSQNVVTRIHARSTFKPEGVEKETTIRVTVDSPLINSYPYINEKEYENNNAKSVEELQKWAQAKFSNEGIDKISDAIKIEAYELDGQVVHMGDTVNLKSWKHNVDAFKKAIAYEFDALKEEYISLTFDDKAGAGGSRTSGGLSSAADAILGVTESAQEIALEKALQNADLDFDHKAGLLRQEISDGIELARARAEEVKQKLSDTINQRFNSFDNGPLKEVKRKAEEALRNAGASTLLAQEAKRIGLDSVARLEAFKSQTTSAQTALSGDLDALKRTIVNDIRPKQAQAETEIAKQVEALSRTKNELAGASTLFAQEAKRIELDSVARLEAFKLQTTSAQTALSGDLDVLKRTIANDIRPKQAQAEAEIAKQVEALSRTKNELAGVKSAQATYEETTTRRLSELTNLANGKASKSELTQTAEELASRIASVQVGGINLLRNTASLLIGDRSKGCWMSSSGGNGRAISVEVLAPPKKMIKNMIRVIENTNGGNKDLTQLVRLRIGEKYTISCYARVASDSPNANVNLLFRSWANNTDLNRKFQKSISHKNWQKYSFTFTADAIENSIQFGQSGAGIIEICAPKIESGTLATDYSEAPEDIEGQISTVESTFKQRADSLEAGVSRLTEGLRTKADISSLNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKASKSELTQTAEELASKIASVQASGRNLFLNSLFKQDISKTGIWTTSTYTATIDSESKYLGHKALKIIGLNPSGRDGGNPKVTYPALGQFGKVIPGSTTNQDVTISFYAKANKNGIMLRSRLGNIGYKTGNVTLSTEIKRYVVHIPKGWTNESKRTTNEWLFNFNQEGTVWIWMPKFEISDVDTSYSEAPEDIEGQISTVESNFKQRADSLEAGVRSLTEGLRTKADISALNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKADKTLVVAEAGKLREEFSKMKVGGRNLWIKSKMVGAVIEKLPENHVTGQKECYRLENNSTLTFNIEPDFSSRLYQKVTFSAWIKYENVVQGRNFWNVFNCFKHYLFRKNSETGVQSGPDYATLGMYKGSADWKYITFTYDYSEKTNFDQLKTSLRFNLEGATSGTAWVTGIKVEIGSVATDWSPAPEDADGLITEAKATFERTAQGLRTDLSAIQEYVNKDGQRQEALQRYTREESARQATAVRELVNRDFVGKATYQEDVKGINQRIEAVKTSANKDIASQIASYRQSVDGKFTDISSQITTYKQDVGGQISGLSNRLTSSEQGTTTQISNLSNRINSNKQGADNQISNLKTQVATNKDNAERQMGRISDQVSANKANADSQFANVTNQLARKVETTDFQRVKETSKLYERILGNTENGIADKVARMALTNQLFQVEVGKYSVSGPNLIKNSDFKNATNEWGSTQNLGRLVKHSFYHNGQKDLMRLSNATKNENFLYSHRFNLERNTDYVLNFRGFNNSALASYDVYILGRRAGESDGFTIVKKVVSSKKLSTSRCEDVSVTFNSGEMDNAYIRFDNNGSSSGTADLYITEVDLYKGYKPRTWQPHPEDAVADANKKLEATQTKMTLLTGSWAVQNINSAGDIISGINLGANGHNRFVGKLTHITGETLIDRAVIKSAMVDKLKTGNFEAGSVTTTILDAEAVTAEKVRFDDAFIRKMTANDAFIDQLTSKRIFSTKVESVISSSTFLEAYQGRIGGFTLGQFDQGGGRWISGVNQFSVGMGNGAGYGVRTAFWANWGNNWNYAGPKAWNVNTDGKMYCRNEVGFYDQVDFSNSSRANFYGNTTFSRSPVFSNGIELGSKDVLGDGWNPKGGRNAVVWWNQVGSGSVKYWMEQKSDRRLKENITDTAVKALDKINRLRMVAFDFIENKKHEEIGLIAQEAETIVPRIVSRDPENPDGYLHIDYTALVPYLIKAIQELNQKIEKMEKTIA
Physico‐chemical
properties
protein length:2153 AA
molecular weight: 238921,69320 Da
isoelectric point:8,57044
aromaticity:0,07710
hydropathy:-0,54046

Domains

Domains [InterPro]
IPR007119
28–326
IPR007119 Coil Coil Coil G3DSA:2.60.120.260 Coil Coil G3DSA:2.60.120.260 G3DSA:2.60.120.260 IPR030392
IPR008979
695–767
IPR008979 IPR030392
APD21560.1
1 2153
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage IPP5
[NCBI] 		1916187 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APD21560.1 [NCBI]
Genbank nucleotide accession
KY065449 [NCBI]
CDS location
range 24780 -> 31241
strand +
CDS
TTGCTTTATCTACTTAATAAAGATGTAAGAACCGTTCGATGGAACGGGGAGCCACTTCATGAAGCGACTTCGGCGATTGTGAAAGAAACTATGAATGGCGATTTTACCTTGACTGTGAAATATCCTATTTCTGATTCTGGTATTTACCAGCTCATCCAAGAAGATATGCTGATAAAGGCTCCGACTCCTGTCTTAGGAGCGCAGCTATTTCGTATCAAGAAACCTGTTGAGCACAATGACCATCTGGAAATCACAGCCTATCACATTTCAGATGATGTGATGCAACGATCTATCACACAAATGAGTGTGACTAGTCAGAGTTGTGGCATGGCTCTTTCTCGCATGGTACAAAACACCAAAACGGCTCTTGGAGACTTCTCATTCAACAGTGATATCCAGGACCGTAGGACATTCAACACGACTGAGACAGAAACCCTGTACTCTGTATTGCTGGACGGCAAGCATAGTATCGCCGGAACGTGGGAAGGCGAGCTGGTGCGTGATAACTTTGCGATGACTGTAAAGAAGAGTCGTGGTGAGAATCGTGGTGTTGTTATTACAACACATAAGAATCTGAAGGACTACCAACGAACCAAAAACAGTCAAAATGTTGTTACAAGGATTCATGCTCGATCCACATTTAAGCCTGAAGGTGTTGAAAAGGAAACAACTATCAGAGTGACTGTTGATAGTCCTCTTATTAATTCTTATCCTTACATAAACGAAAAAGAGTATGAGAACAACAACGCAAAATCCGTTGAAGAGTTGCAGAAGTGGGCACAGGCTAAGTTCTCAAATGAGGGCATTGACAAGATCTCTGACGCTATCAAGATTGAAGCTTATGAACTTGATGGGCAAGTTGTTCACATGGGTGATACGGTCAATCTCAAGAGTTGGAAACATAATGTTGATGCATTTAAGAAAGCTATTGCTTATGAGTTCGATGCCTTAAAAGAAGAATATATCTCTCTGACTTTCGATGATAAGGCAGGAGCTGGTGGTTCTAGAACATCTGGTGGCTTATCTAGCGCAGCGGATGCCATCCTTGGAGTAACAGAATCTGCACAAGAAATCGCCCTTGAAAAGGCTCTTCAAAATGCTGACTTAGACTTTGATCATAAGGCTGGATTGCTTAGACAGGAAATTTCTGACGGTATTGAACTTGCAAGAGCAAGAGCTGAAGAAGTCAAGCAAAAACTGTCTGACACTATCAATCAGCGCTTTAATAGCTTTGACAACGGGCCATTGAAAGAAGTTAAGCGCAAGGCTGAGGAAGCTTTGCGAAATGCTGGCGCAAGTACCCTGCTTGCACAGGAAGCTAAGCGGATTGGGCTGGATTCTGTCGCTAGACTTGAAGCGTTTAAGTCGCAGACTACGAGCGCACAAACGGCTCTGTCAGGTGACTTGGACGCTCTGAAACGGACTATCGTGAATGATATTCGACCGAAGCAAGCACAGGCTGAAACTGAGATTGCCAAGCAAGTTGAAGCACTTAGCCGGACTAAGAATGAACTGGCTGGCGCAAGTACCCTGTTTGCACAGGAAGCTAAGCGGATTGAGCTGGATTCTGTCGCTAGACTTGAAGCGTTTAAGTTGCAGACTACGAGCGCACAAACGGCTCTGTCAGGTGACTTGGATGTTCTAAAACGAACTATCGCAAACGATATTCGACCGAAGCAAGCACAGGCTGAAGCTGAGATTGCCAAGCAAGTTGAAGCACTTAGCCGGACTAAAAATGAACTGGCTGGCGTGAAGTCAGCGCAAGCGACGTATGAGGAGACGACGACTCGTAGACTGTCAGAACTGACCAACTTGGCTAATGGTAAAGCCAGCAAGTCAGAACTCACGCAGACGGCTGAGGAGCTAGCTAGTCGGATTGCGAGTGTGCAAGTCGGAGGAATTAACCTCTTGCGTAATACTGCGAGTTTGTTGATTGGCGATCGTTCAAAAGGATGTTGGATGAGTTCAAGCGGAGGAAATGGGCGAGCGATTAGCGTAGAAGTTTTGGCTCCTCCCAAAAAAATGATAAAAAACATGATTCGTGTTATTGAAAATACGAATGGTGGAAATAAAGATTTAACTCAACTTGTTAGATTGCGAATTGGTGAAAAGTACACGATTTCTTGTTATGCAAGGGTTGCTAGCGATAGCCCAAATGCAAACGTGAACTTGCTATTTCGTTCGTGGGCAAATAATACCGATTTAAATCGCAAATTTCAGAAATCCATCTCTCATAAAAATTGGCAAAAATATTCATTTACATTTACTGCTGATGCAATTGAAAATTCAATTCAATTTGGACAATCTGGCGCAGGAATTATCGAAATATGCGCTCCGAAAATCGAATCAGGAACGTTAGCGACTGATTACAGCGAAGCTCCTGAAGATATAGAAGGTCAGATTTCAACAGTTGAATCGACCTTCAAACAGCGTGCTGATTCACTCGAAGCTGGTGTAAGCCGTCTGACTGAAGGCCTTAGAACCAAAGCCGATATCAGCTCACTCAACGTGACTGCTGAGAATATCCGGCAATCTGTGAAGAGTCTTGAGACAGACACGCAGAACAAGCTAAATCAGAAGTTGAGTCAGGCTGAATTTGAGGTGCGAGCCGGCTCTATCCGTCAGGAAATCCTGAACGCAACCAAGGATAAAGCCAGCAAGTCAGAACTCACGCAAACAGCTGAGGAGCTGGCTAGTAAGATAGCGAGTGTGCAGGCATCCGGTCGAAATCTATTCTTGAATTCACTATTCAAGCAGGATATTTCAAAAACAGGAATTTGGACAACGAGTACATATACGGCTACTATCGATAGCGAAAGTAAGTATCTTGGACACAAGGCTCTTAAAATTATAGGTCTGAATCCATCTGGCCGTGATGGAGGTAATCCCAAGGTTACTTATCCAGCTCTGGGTCAATTCGGGAAAGTAATTCCCGGAAGTACGACTAATCAAGATGTAACCATTAGTTTTTATGCTAAGGCAAATAAAAATGGAATAATGCTAAGATCTCGATTAGGGAATATCGGATATAAAACTGGAAATGTGACATTGTCGACAGAAATTAAACGATATGTTGTCCATATTCCAAAAGGTTGGACAAACGAATCCAAGCGGACCACAAATGAATGGTTGTTCAATTTCAACCAGGAAGGAACCGTTTGGATTTGGATGCCGAAGTTTGAAATAAGCGATGTAGATACTTCTTATTCAGAAGCTCCTGAAGATATAGAAGGTCAGATTTCAACAGTTGAATCCAACTTTAAACAGCGTGCTGATTCACTCGAAGCTGGTGTAAGAAGCTTGACTGAAGGCCTTAGAACCAAAGCGGATATCAGCGCACTCAACGTGACTGCTGAAAATATTCGGCAATCTGTGAAGAGTCTTGAGACAGACACGCAGAACAAGCTAAATCAGAAGTTGAGTCAGGCTGAATTTGAGGTGCGAGCTGGCTCTATTCGTCAGGAAATCCTGAACGCAACCAAGGATAAAGCAGATAAGACTCTTGTCGTGGCTGAAGCTGGGAAATTGCGTGAAGAATTTTCAAAAATGAAGGTGGGAGGCCGGAATCTATGGATAAAATCCAAGATGGTTGGAGCTGTAATTGAAAAATTACCTGAAAACCACGTCACAGGTCAAAAAGAATGCTATAGGCTAGAGAACAACTCCACTTTAACATTCAACATTGAACCAGATTTCAGCTCAAGGTTGTATCAAAAAGTTACTTTTAGCGCTTGGATCAAGTACGAAAATGTAGTCCAAGGTCGAAATTTTTGGAATGTATTTAATTGCTTCAAACATTATCTTTTTAGAAAAAATAGTGAGACCGGAGTACAGAGTGGTCCAGATTATGCTACGCTTGGTATGTATAAAGGTTCGGCAGATTGGAAATATATTACATTCACTTATGACTACTCTGAAAAAACAAATTTTGATCAATTGAAGACATCGTTGCGATTCAATCTTGAAGGTGCTACAAGCGGTACAGCTTGGGTAACAGGAATCAAGGTTGAAATCGGTAGTGTGGCGACGGACTGGAGTCCTGCGCCTGAGGACGCTGATGGTCTCATCACTGAAGCTAAGGCTACCTTTGAGCGGACAGCTCAGGGCTTGCGAACCGACTTATCAGCTATTCAGGAATATGTAAATAAAGACGGTCAGCGACAGGAAGCCCTACAGCGCTATACTCGTGAGGAGAGCGCGAGACAAGCGACAGCAGTCCGTGAGCTGGTCAATCGTGATTTCGTTGGTAAGGCTACTTATCAAGAAGATGTTAAGGGTATCAATCAGAGGATTGAAGCTGTTAAAACGAGTGCGAATAAAGACATCGCTAGTCAAATCGCTAGCTATCGTCAATCTGTAGATGGTAAGTTCACGGATATTTCAAGTCAGATAACTACTTATAAGCAAGATGTGGGCGGTCAAATCAGTGGTCTATCAAATAGACTTACAAGCAGTGAGCAAGGAACCACTACTCAGATTTCAAATCTTTCAAATCGGATAAACAGTAACAAACAAGGCGCAGATAATCAGATTTCAAATTTAAAGACTCAGGTCGCTACAAACAAGGATAATGCTGAACGACAAATGGGTAGAATATCTGATCAGGTTTCTGCAAACAAAGCGAATGCTGATAGTCAATTTGCGAATGTGACCAATCAACTAGCGCGAAAAGTAGAGACTACTGATTTCCAGCGTGTTAAGGAAACCAGTAAACTTTACGAGCGGATTTTGGGCAATACTGAAAATGGAATTGCGGATAAGGTTGCTCGCATGGCTCTGACCAATCAACTGTTTCAGGTTGAGGTTGGGAAATATAGTGTAAGCGGCCCTAACCTCATTAAGAATAGTGATTTTAAAAATGCTACGAATGAATGGGGCTCAACTCAAAATTTAGGAAGATTGGTTAAGCATAGCTTTTATCACAACGGGCAGAAAGACCTTATGCGTTTAAGTAATGCAACTAAAAACGAAAACTTTTTGTATAGTCACCGTTTTAATCTTGAACGAAATACTGACTATGTACTGAATTTTAGAGGATTTAACAACAGTGCTCTCGCAAGCTATGATGTTTATATTTTGGGACGAAGAGCAGGCGAGAGCGATGGATTCACAATCGTTAAGAAAGTTGTCAGCAGCAAGAAACTATCTACCTCTAGATGCGAAGATGTCTCAGTAACTTTTAATTCCGGAGAAATGGATAATGCTTACATTCGTTTTGATAACAATGGCTCATCATCAGGAACAGCTGATTTGTATATTACAGAAGTTGACTTGTACAAAGGTTATAAACCTAGAACATGGCAACCACATCCAGAAGATGCAGTCGCAGATGCGAATAAGAAGCTTGAAGCCACGCAAACAAAAATGACTCTACTAACTGGCTCATGGGCAGTTCAAAACATCAACTCGGCTGGAGATATCATCTCTGGAATCAATCTTGGCGCCAATGGACATAACCGCTTCGTTGGGAAATTAACCCATATAACAGGCGAGACCCTGATTGACAGAGCAGTCATCAAGTCTGCCATGGTTGATAAGCTCAAAACGGGCAATTTTGAAGCTGGTTCGGTCACGACTACGATATTAGACGCTGAAGCGGTCACGGCCGAGAAAGTGAGATTTGATGATGCGTTTATTAGAAAAATGACTGCAAATGACGCTTTTATTGACCAACTGACATCTAAACGTATCTTCTCTACTAAGGTTGAGTCCGTCATTTCTAGTTCAACCTTCCTAGAAGCCTATCAAGGTCGAATTGGTGGATTCACACTTGGTCAATTTGACCAGGGTGGCGGTCGCTGGATTTCAGGTGTCAATCAGTTCTCTGTTGGTATGGGGAATGGTGCCGGGTATGGAGTCCGGACAGCCTTCTGGGCGAACTGGGGAAATAATTGGAACTATGCCGGACCTAAAGCATGGAACGTCAATACTGATGGGAAAATGTACTGTAGGAATGAAGTCGGTTTTTATGATCAAGTGGATTTTTCGAATTCATCTAGAGCAAACTTCTATGGGAATACTACTTTTTCTCGTTCTCCTGTGTTTTCAAATGGTATCGAACTTGGAAGTAAAGATGTGCTTGGTGATGGTTGGAATCCCAAAGGCGGAAGGAATGCGGTTGTTTGGTGGAATCAGGTCGGTAGCGGTAGCGTGAAGTATTGGATGGAACAAAAATCAGACAGACGCTTAAAAGAGAACATCACAGATACAGCTGTGAAAGCCTTGGACAAAATCAACAGATTAAGAATGGTTGCATTTGATTTCATCGAAAATAAGAAACATGAGGAGATTGGTCTAATAGCTCAAGAGGCTGAAACCATCGTTCCAAGAATTGTCTCACGAGATCCTGAGAATCCAGATGGCTATCTACATATCGACTATACCGCTTTAGTTCCTTACTTAATCAAGGCTATTCAAGAATTAAATCAAAAAATAGAAAAAATGGAGAAAACAATAGCATGA

Tertiary structure

PDB ID
4f8df1e57b01fd180423fc878f7e0706bef49dbbd9c0b5f218ca5f225713b141
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6100
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Pneumococcal prophages are diverse, but not without structure or history Brueggemann,A.B., Harrold,C.L., Rezaei Javan,R., van Tonder,A.J., McDonnell,A.J. and Edwards,B.A. 2017 28218261 GenBank