Protein

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Genbank accession
CEK40412.1 [GenBank]
Protein name
Minor structural protein Tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MILDNSPADSWIRITGVIVTYNNTLYQVVDKETNKKYIYWDADNPGTLKVSNVRLPEGNTQFLVVVNDNGKHTEVPINSSIFNISFDGNSRKNTEEQIWGLYETDEEHNEKFVVIEKDIDGIHQTVLEVQEDASHIKENMSLIDQRAENVNILVKEVTKNFGGSQENIILRENINKAIIKLNTDLGTFSSNMSNYFNDNEITDEEKEKIDIELNLLDTDKTSLYIELQKLIDRTTGVDLVAINTSKTALNAASTNLNSIINSVISDGIITPSDRILAINANAQYNLKINELKNTVDKIYITGMGGSISEEFSQINATAKEIKLEVAKVDGATKTNAAEIKLTKDDITMMVTRNNSGSIVGIKPDKIEFGFNDISNYVEISRSGLTVNQGAIACDILTTPSGHEPIIRLFGSSRSGFAIDARQSDGSSQASAIRLKYDSNNYFWVGYDTAEIYVDGEEHFIVERDDTFVRCGGATFTFTNGDSLGVGYSFYPERSVTDLGCERYKWRYLYARSTLSESDKKFKENIVYIKDIKNRTRSSITPTPFLDFIRDDFKPATFDYIAEKDRTIADSQIGFIANDFKDSYVGKTFLYDYGEENGLMFSPSGYTTVVATALQEEIQKREELEMIINELNEKINNLGGY
Physico‐chemical
properties
protein length:640 AA
molecular weight: 71899,34620 Da
isoelectric point:4,69373
aromaticity:0,09063
hydropathy:-0,41281

Domains

Domains [InterPro]
IPR030392
517–627
IPR030392
Coil
613–633
Coil
CEK40412.1
1 640
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiCD211
[NCBI] 		1582152 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CEK40412.1 [NCBI]
Genbank nucleotide accession
LN681537.2 [NCBI]
CDS location
range 39118 -> 41040
strand +
CDS
TTGATATTGGATAATTCACCAGCAGATTCATGGATTAGAATTACTGGAGTAATTGTTACTTATAATAACACACTTTATCAGGTAGTAGATAAAGAAACAAATAAAAAATATATATACTGGGATGCTGATAATCCAGGGACATTGAAAGTTTCTAATGTAAGATTACCAGAAGGAAATACACAATTTTTAGTAGTTGTAAATGATAATGGAAAGCATACAGAAGTTCCTATAAACTCATCAATATTCAATATATCTTTTGATGGTAATTCAAGAAAAAACACTGAAGAACAAATCTGGGGATTGTATGAAACTGATGAAGAACACAATGAAAAGTTTGTAGTTATTGAAAAAGACATAGATGGAATACATCAAACAGTTTTAGAAGTACAAGAAGATGCATCTCATATAAAAGAAAATATGTCTCTTATAGACCAGAGAGCTGAAAATGTAAATATATTAGTAAAAGAAGTAACTAAAAATTTTGGTGGTTCACAAGAAAATATAATATTAAGAGAAAACATAAATAAAGCTATAATTAAGTTAAATACAGACTTAGGAACATTTAGCTCTAATATGTCTAATTATTTTAACGATAATGAGATTACAGATGAAGAAAAAGAAAAGATTGATATTGAACTTAATTTATTAGATACAGACAAAACAAGTTTATATATAGAGCTACAAAAACTTATTGATAGAACTACTGGAGTAGACTTAGTAGCAATAAATACTTCAAAAACAGCATTGAATGCAGCAAGTACCAATCTAAACTCTATAATCAATTCAGTTATTTCAGATGGTATAATTACACCTTCAGACAGAATTTTAGCTATAAATGCAAATGCTCAATATAACTTAAAGATAAATGAACTTAAAAATACAGTCGATAAAATTTACATAACAGGTATGGGTGGAAGTATATCAGAGGAATTTTCACAGATAAATGCTACAGCTAAAGAAATAAAATTAGAAGTAGCAAAAGTTGATGGTGCAACTAAAACAAATGCTGCTGAAATTAAATTAACTAAAGATGATATAACCATGATGGTTACAAGGAATAACTCTGGCTCAATTGTAGGAATTAAACCTGATAAAATTGAATTTGGATTTAATGATATATCAAATTATGTAGAGATAAGCAGGAGTGGTCTAACAGTAAATCAAGGAGCTATAGCATGTGATATATTAACTACTCCATCTGGACATGAACCAATAATCAGATTATTTGGAAGTAGCAGGTCTGGATTTGCAATAGATGCAAGACAATCAGATGGTTCTAGTCAAGCCTCAGCAATAAGATTAAAATATGATAGCAATAATTATTTTTGGGTAGGATATGATACTGCTGAGATTTATGTTGATGGAGAAGAACACTTTATTGTTGAAAGAGATGATACTTTTGTAAGATGTGGTGGAGCTACTTTTACATTTACAAATGGAGATAGTTTAGGTGTAGGATATTCATTTTATCCAGAGCGTTCTGTAACTGATTTAGGTTGTGAGCGTTATAAATGGAGATATTTATATGCTCGTTCTACTCTGAGTGAATCTGATAAAAAGTTTAAAGAGAATATAGTATACATAAAAGATATTAAGAATAGAACTCGTTCAAGTATCACTCCAACACCATTTTTAGATTTTATAAGAGATGATTTTAAACCAGCAACATTTGATTATATAGCAGAAAAAGATAGGACAATTGCAGATAGTCAAATAGGGTTTATAGCTAATGATTTTAAAGATAGTTATGTTGGAAAAACATTTCTATATGACTATGGAGAAGAAAATGGATTAATGTTTAGCCCATCTGGTTATACAACTGTTGTAGCAACTGCACTTCAAGAAGAAATACAAAAAAGAGAAGAATTAGAGATGATAATTAATGAATTAAACGAGAAAATTAATAATTTAGGAGGATATTAA

Tertiary structure

PDB ID
d590e3f34777d8d6b985d4e539ed5093cf204a072f3096d7be2a8f67f294fa43
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6733
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
High prevalence and genetic diversity of large phiCD211-like prophages in Clostridium difficile Garneau,J.R., Sekulovic,O., Dupuy,B., Soutourina,O., Monot,M. and Fortier,L.C. 2018-02 — GenBank