Protein

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UniProt accession
K7R6Q7 [UniProt]
Protein name
Tail sheath protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAEQYLHGAEVVEIDNGARPIRTAQSGVIGLVGTAPDADATAFPLNTPVLIAGSRREAAKLGAGGTLPQAIDGIFDQTGAVVVVIRVDEGVDSAATQSNVIGKVDADTEQYTGILALLSAENTVKVQPRILIAPGFSNQKAVADQLVSVADKLRGYVILDGPNTTDAAAITYRELFGSRRCEVVDPWYKVWDVETSAHIIQPPSARHAGVMAKVHNTLGFWWSNSNQEILGIDGLCRPVDFKLDDPTCRANLLNAKEVTTTIQQNGFRVWGDRTCSADSKWAFKNVVITNDMIADSLVRNHLWAVDRNITKTYVEDVTEGVNNYLRHLKNIGAIAGGECWVDPELNSPDQIQQGKVYFDYDFSAYAPAEHITFRSHMVNGYLTEVV
Physico‐chemical
properties
protein length:386 AA
molecular weight: 42040,81980 Da
isoelectric point:5,01004
aromaticity:0,07772
hydropathy:-0,12280

Domains

Domains [InterPro]
IPR054564
27–87
IPR054564 IPR052042
G3DSA:3.40.50.11780
41–233
G3DSA:3.40.50.11780 IPR020287
IPR035089
112–275
IPR035089
K7R6Q7
1 386
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaM_MAR
[NCBI] 		1229754 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

Description Category Evidence (source)
GO:0098027 virus tail, sheath Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0099000 symbiont genome ejection through host cell envelope, contractile tail mechanism Biological Process IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
aaaaac54460bdc0d9a0408e3552a61e54aca71f3e1e125a2d413415a2e9c290d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9581
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Vibrio parahaemolyticus bacteriophage vB_VpaM_MAR. Alanis Villa A, Kropinski AM, Abbasifar R, Griffiths MW 2012-12 23118463 PubMed
Complete Genome Sequence of Vibrio parahaemolyticus Bacteriophage vB_VpaM_MAR Argentina Alanis Villa, Andrew M. Kropinski, Reza Abbasifar, Mansel W. Griffiths 2012-12 10.1128/JVI.02518-12 DOI