Protein

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Genbank accession
CAB5145000.1 [GenBank]
Protein name
Pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MTVPTTTSRADYTGNGVTTAWTVPFYFLDPTHIQVIRTQISTGVATTLALTTDYTVAGAGVQAGGTVTTVAALTTDQRLSVLRNVPLTQLAHYVPNDPFPAATHEMIVDQLTMEVQQLYENIGRALTLSANSSGVSASLPGPTPNNLIGWNSTATALVDVPIASLATTIVANTWQVDKFNGTGSQTAFTLALNPGSTNAVICSVGGVSQTPGVNFSISGNVATFLTGAPPAGTGNVVFQYGQAVTTAAMDASTVSYTPAGAGALNTNVQSKLRESVSVRDFGAKGDGTTDDTAAINAANTYVASLAHGGTVFFPDGLYRTTANISIPAGVSWQGESPGWYYGSSPVTYTGVLIYKQHTQDAVTITSSGQTTDGQVIDSIGILGRGAVDVGGSGFVLGKVATCVLHRCNVFHVYLHSFVIGDGTANSYTNTLEDCYSNNPQTGMNYSINSTLFRGHKLISDGGTIGISFTANATNWSIGECHFEGWSNVGMSIAGGQGKTYGKTYLPSTNILGLVGIYVSGSASGIAIVGAQVAFTNVRTAGSIGMQCVGTTSAITLRDSTIASAEVGVSDVSGASWAATILDGNIFNNCSVGITATTNGCRYLNNYFVGSTTYDINHNGGSGGLWSGNKFSLTGSSAIKPTFSGVEGLYGGNCVKNNSGFVTRNQGWISSQASGATIAHGLSYTTASPNISTIFPSISFIGGAGIGVTSPVSFNGLTGTTITANWSGTTPQQIYWQANMACDF
Physico‐chemical
properties
protein length:743 AA
molecular weight: 76492,13280 Da
isoelectric point:5,57843
aromaticity:0,08748
hydropathy:0,10619

Domains

Domains [InterPro]
IPR012334
235–580
IPR012334
IPR011050
274–568
IPR011050
IPR024535
276–490
IPR024535
CAB5145000.1
1 743
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB5145000.1 [NCBI]
Genbank nucleotide accession
LR798196 [NCBI]
CDS location
range 31602 -> 33833
strand +
CDS
ATGACCGTACCCACCACAACCTCACGCGCAGACTACACGGGCAATGGCGTGACCACGGCCTGGACGGTGCCGTTCTACTTCCTGGACCCGACCCACATCCAGGTCATCCGCACCCAGATCAGCACTGGCGTGGCCACCACGTTGGCGCTCACCACCGACTACACCGTGGCTGGCGCTGGCGTACAGGCTGGCGGGACTGTCACCACCGTGGCTGCGCTCACCACCGATCAGCGGCTGTCCGTTCTGCGAAACGTGCCGCTCACCCAGTTAGCGCACTACGTCCCAAACGATCCGTTCCCTGCTGCCACGCACGAAATGATCGTGGACCAGTTGACGATGGAAGTGCAGCAGCTTTACGAGAACATTGGCCGGGCGCTCACACTGTCCGCGAACTCCAGTGGCGTATCTGCATCGCTACCTGGGCCAACACCTAACAATTTGATCGGCTGGAACAGCACGGCCACTGCGCTGGTGGACGTTCCCATAGCATCGCTGGCTACAACCATCGTGGCCAACACCTGGCAGGTGGACAAGTTCAACGGCACGGGCTCGCAGACAGCATTCACACTGGCGCTGAACCCTGGTTCCACGAACGCTGTGATCTGCTCAGTGGGCGGTGTGTCTCAGACCCCTGGCGTGAACTTTAGCATCTCCGGCAACGTCGCCACATTTCTGACTGGTGCTCCGCCAGCCGGCACTGGCAACGTAGTGTTCCAGTACGGCCAAGCCGTAACCACCGCGGCCATGGACGCCAGCACCGTGTCTTATACGCCGGCTGGAGCGGGCGCGCTTAACACCAATGTTCAGAGCAAGCTGCGCGAGAGCGTGAGTGTTCGGGATTTCGGTGCGAAAGGAGATGGCACAACAGACGACACTGCGGCCATCAATGCGGCGAATACCTATGTCGCATCGTTAGCTCACGGCGGAACGGTATTTTTCCCGGACGGTCTTTACCGGACAACTGCCAATATCAGCATTCCGGCAGGGGTTAGCTGGCAGGGAGAGTCCCCAGGCTGGTACTACGGTTCTTCCCCTGTCACATACACCGGCGTATTGATTTACAAGCAGCACACTCAAGACGCCGTAACCATTACGTCATCCGGTCAAACCACTGACGGACAGGTTATTGATTCAATCGGCATCCTTGGCCGTGGCGCAGTTGATGTTGGTGGCAGTGGGTTTGTGCTTGGCAAAGTCGCTACGTGCGTGCTGCATCGCTGCAATGTTTTCCACGTATACCTGCACTCGTTTGTGATTGGCGATGGGACCGCCAATTCGTACACCAACACGCTGGAAGACTGCTATTCGAATAACCCGCAAACGGGGATGAACTACTCCATCAACAGCACGCTGTTCCGTGGGCACAAGCTGATTTCTGATGGTGGAACAATTGGTATCTCGTTCACAGCCAATGCGACCAATTGGTCTATCGGTGAATGCCACTTTGAAGGGTGGTCGAATGTGGGCATGTCTATCGCGGGTGGACAGGGCAAGACCTACGGCAAAACATATTTACCAAGCACAAATATTCTGGGGCTTGTCGGCATATATGTTTCCGGTTCAGCCAGCGGAATTGCAATTGTTGGAGCGCAAGTAGCATTCACAAATGTGAGAACTGCCGGTTCAATTGGCATGCAGTGCGTTGGCACAACGTCTGCAATTACTTTGCGTGACTCGACCATCGCATCAGCAGAAGTTGGCGTGTCCGATGTATCTGGCGCATCGTGGGCAGCGACCATCTTGGACGGAAATATCTTTAACAATTGCTCAGTCGGAATTACTGCGACCACCAACGGTTGTAGGTATCTGAATAATTATTTTGTTGGGTCAACGACGTATGACATAAACCACAATGGTGGCTCGGGTGGCTTGTGGTCTGGAAACAAATTCTCCCTTACTGGATCATCGGCAATTAAGCCAACATTCAGCGGTGTTGAAGGTTTGTACGGCGGCAATTGCGTCAAGAACAATTCGGGTTTTGTCACTCGCAATCAAGGCTGGATTTCTTCCCAGGCATCTGGTGCAACGATTGCTCACGGGTTGTCTTACACCACCGCGTCCCCGAACATATCGACGATTTTCCCGAGCATTAGTTTTATAGGTGGCGCAGGTATAGGCGTTACCAGTCCAGTTTCTTTCAATGGATTGACCGGAACCACGATAACGGCGAACTGGTCAGGAACAACCCCGCAGCAAATTTACTGGCAAGCAAATATGGCTTGTGATTTCTGA

Tertiary structure

PDB ID
a13ad5cb604afcf7ed49a05404a2e278330523caeb4f07faf17f12e8077b8c7e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8266
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50