Protein

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Genbank accession
AXG66401.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MANVIKKRTLWNVGSAAIGGAWNLDARRGLLRGVIYINKADYNSRKPLTITLVASDGSTKTFDALLGATVRDVTLSEVSDYGNDLLSISVTSEASVLDGIGLYQIDAQFTVDDGQPSLDGYTKSEVDDKVSALLPKGSVDKLNKAQATTSSTVSQLASNADLATTISKVNDVISCLMAVRGTNSSVFTTLNSLLDNLTSGSVMKS
Physico‐chemical
properties
protein length:205 AA
molecular weight: 21587,06190 Da
isoelectric point:5,10865
aromaticity:0,04878
hydropathy:0,00244

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage vB_DsoP_JA10
[NCBI] 		2283033 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXG66401.1 [NCBI]
Genbank nucleotide accession
MH460459 [NCBI]
CDS location
range 37292 -> 37909
strand +
CDS
ATGGCTAACGTAATCAAGAAAAGAACCCTATGGAATGTTGGTAGTGCAGCTATCGGTGGTGCGTGGAATCTGGATGCTCGACGTGGTTTACTGCGTGGTGTCATCTACATCAACAAGGCTGACTACAATAGCCGTAAGCCGCTGACGATTACGCTGGTGGCCTCTGATGGTTCCACTAAGACCTTCGATGCGCTCTTGGGAGCCACTGTGCGGGACGTTACGCTGTCGGAGGTGTCTGACTACGGGAACGACCTGCTGTCCATCTCAGTGACCTCTGAGGCGTCTGTATTGGACGGTATCGGTCTCTATCAGATTGACGCTCAGTTCACTGTCGATGACGGTCAGCCTTCTCTCGATGGCTACACTAAGTCAGAGGTGGATGATAAAGTCTCTGCGCTGCTGCCGAAAGGTAGTGTCGATAAGCTGAACAAAGCACAGGCAACCACGAGTTCCACTGTGTCTCAGTTGGCTTCAAACGCAGACCTCGCCACGACTATCAGTAAGGTCAACGATGTGATTAGCTGTCTGATGGCTGTGCGTGGGACCAACAGTTCTGTGTTCACTACCCTCAACTCGCTGCTCGACAACCTGACCTCTGGCAGTGTCATGAAGTCGTAA

Tertiary structure

PDB ID
3476ee20c63d05cd3d9484e3222b8d121746e9797aaed0d2ed89ea5720f76901
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5094
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Jumbo Bacteriophages Are Represented Within an Increasing Diversity of Environmental Viruses Infecting the Emerging Phytopathogen, Dickeya solani Day,A.W., Ahn,J. and Salmond,G.P.C. 2018 — GenBank