Protein

View in Explore
Genbank accession
QNJ55185.1 [GenBank]
Protein name
long tail fiber distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MAKLGPTNIFGTLNVSSMAQVGSLVVDTELFAQNTQKVFHDAYHPNADKWTTARTLNLSGDASGSVSWDGSSDVTLNVTVADDSHTHETQYISKTQPYNDNILSGSIGGSDGKPLLQVNGASAYLGSTGRAGLQLATSTNPEWVGGGGAYKLFNDAYHPNADKWTNARTLTLSGDLSGSVSIDGSSNVTLSASVANDSHTHTWIVVDDTRDTPITPNTLVARSVSAQFTNLDRPGGFSAWYSALSVNGWDSGYQAWQLLGGSNNFSDNELYFRRGLTTSWSSTQRIFMDDYHPNADRWTTSRTLTLNGDASGSVSINGSSNVTLTVTVANDSHTHDGRYYTESESNSRYVYKSGDTMTGNLTFKAGSHAGAVIKALDGGANGTNLIFSPGGNLVIGSGESTAANAVLSGNTGEDLHAGSDGTIFMYTNAQTWGSRKTYTLSTTGDFTAPGNITAYSDIRIKTDIKRIVNPLEKIDSLNGYTYERTDIDGPRQTGVIAQEVIEVLPEAVVEQNNMYSVSYGNMVGLLIEGIKEEKRKREELEKRLESLEKLLK
Physico‐chemical
properties
protein length:552 AA
molecular weight: 59245,20770 Da
isoelectric point:5,08063
aromaticity:0,08152
hydropathy:-0,42482

Domains

Domains [InterPro]
IPR005601
35–77
IPR005601 IPR030392 Coil
IPR030392
456–544
IPR030392
QNJ55185.1
1 552
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_ValM_R11Z
[NCBI] 		2759335 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNJ55185.1 [NCBI]
Genbank nucleotide accession
MT612989 [NCBI]
CDS location
range 181590 -> 183248
strand +
CDS
ATGGCAAAATTAGGTCCTACTAACATTTTCGGTACGTTGAACGTATCGTCAATGGCACAGGTCGGGAGTCTAGTTGTTGATACTGAGCTTTTTGCGCAAAATACGCAAAAGGTGTTTCATGATGCCTATCACCCAAATGCAGATAAATGGACTACCGCTCGTACGTTGAATTTAAGCGGCGACGCGAGTGGTAGCGTCTCTTGGGATGGTAGCTCAGATGTTACATTAAACGTCACAGTAGCAGACGACTCACATACTCACGAAACGCAATATATTAGTAAAACACAACCGTATAACGATAATATTCTAAGCGGGTCAATTGGCGGCTCAGATGGCAAACCGTTACTACAAGTTAATGGGGCTTCTGCGTATCTAGGCTCGACTGGGCGTGCAGGGTTACAATTAGCAACAAGCACCAACCCTGAGTGGGTTGGTGGTGGTGGGGCATATAAACTTTTTAATGATGCCTATCACCCAAATGCTGATAAATGGACTAATGCACGAACATTGACATTGAGTGGTGATTTAAGTGGCTCAGTATCTATTGATGGTAGTTCTAACGTAACGTTATCAGCTTCGGTTGCTAATGACTCACACACGCATACGTGGATTGTTGTTGACGATACTCGCGATACACCGATTACACCTAATACGCTTGTGGCTCGATCAGTATCTGCACAGTTTACAAACTTAGACAGACCGGGCGGTTTTTCAGCTTGGTATTCTGCGTTATCTGTGAACGGCTGGGATTCTGGTTATCAAGCATGGCAATTACTTGGTGGTAGTAACAATTTTTCTGATAACGAGCTGTATTTCCGTCGTGGCTTGACAACTTCTTGGAGTAGTACACAGCGCATTTTCATGGACGATTATCACCCAAATGCAGACCGATGGACAACTTCTCGTACGTTGACGCTGAACGGTGATGCAAGTGGTTCAGTTTCAATTAACGGTAGTTCGAACGTGACTTTAACCGTTACTGTTGCTAATGACTCACACACTCACGACGGGCGATATTACACAGAATCCGAATCGAATTCAAGATATGTGTATAAGTCTGGTGATACGATGACTGGCAATCTGACATTCAAGGCTGGTTCACATGCGGGTGCTGTTATTAAGGCATTAGATGGTGGAGCTAACGGGACGAACTTGATTTTTTCACCGGGTGGTAATCTAGTAATCGGTTCGGGTGAGTCAACTGCGGCAAATGCAGTCTTATCGGGAAATACGGGAGAAGATTTGCACGCTGGGTCTGATGGTACAATATTCATGTATACTAATGCTCAAACATGGGGCAGCCGTAAAACGTATACACTATCAACTACTGGTGATTTTACAGCACCGGGTAATATCACTGCGTATTCTGATATAAGAATCAAAACTGATATTAAGCGCATTGTTAACCCACTTGAAAAAATTGACAGTCTGAATGGTTATACGTATGAGCGTACTGACATTGACGGGCCTCGTCAAACTGGTGTGATTGCTCAAGAAGTTATTGAAGTTCTACCAGAAGCAGTTGTCGAGCAAAACAACATGTATTCTGTTTCATACGGGAACATGGTTGGGTTGTTGATCGAAGGTATTAAAGAAGAGAAACGAAAACGCGAAGAACTTGAAAAACGTCTAGAAAGTCTAGAAAAACTACTTAAATAA

Tertiary structure

PDB ID
1d4da22190d877376f335f03dad5826dcc0421d6e5dbeb7dd0eb860aac169995
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6618
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50