Protein

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Genbank accession
CCG27838.1 [GenBank]
Protein name
putative serine protease
RBP type
TSP
Evidence DepoScope
Probability 0,94
Protein sequence
MPRKEVVAHILEKRRSELLSKPNVVGYSNVIQKRIRRGRVVDEPVIRVYVKKKLPRNLLRPQDLVPEEVEGIRTDVVEIGEVEAWALLQPRAAASPLYTGRYRPVIAGVSIGHYQITAGTLGWYVKAPNAEILFASNAHVFTPNASGQEGQYEGDPILQPGPYDGGRNPDDKVAEYVWHKRVVPEGEGGINHIDFAVARPVVDYLVRNYHGTQPVHAIGLLFAGSSSITVVCKCKHIYNEGYRFIDFTGAEMKCVDPLDDEVTLSATKEGRTTGYHGNIITDESAAVRVNYGGFTAYFEDVIFFRNPFGQPGDSGSFVFIPDASFD
Physico‐chemical
properties
protein length:326 AA
molecular weight: 36147,47000 Da
isoelectric point:6,16444
aromaticity:0,10123
hydropathy:-0,25920

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Alphaspiravirus yamagawaense
[NCBI] 		1157339 Viruses > Viruses incertae sedis > Spiraviridae > Alphaspiravirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CCG27838.1 [NCBI]
Genbank nucleotide accession
HE681887 [NCBI]
CDS location
range 10493 -> 11473
strand +
CDS
ATGCCAAGAAAAGAGGTTGTAGCACATATCCTGGAGAAGCGGAGGAGCGAGCTCTTATCTAAGCCCAACGTTGTAGGCTATTCTAACGTTATTCAGAAGAGGATTAGGAGGGGCAGGGTAGTTGATGAGCCCGTTATACGTGTTTACGTGAAGAAGAAGCTCCCGAGGAACCTGCTGCGGCCTCAGGACTTGGTGCCAGAAGAGGTTGAGGGAATCAGGACGGATGTCGTTGAGATAGGGGAGGTAGAGGCATGGGCTTTACTGCAGCCTAGAGCTGCAGCTTCTCCACTCTATACTGGGAGATACAGGCCTGTGATAGCTGGGGTTTCGATAGGGCATTATCAGATAACTGCAGGGACCCTTGGATGGTATGTCAAAGCTCCTAATGCAGAGATACTATTTGCTAGTAATGCTCATGTATTCACACCTAATGCATCAGGGCAGGAGGGGCAGTATGAGGGAGACCCCATCCTCCAGCCTGGACCATACGACGGTGGCAGAAACCCAGATGACAAAGTGGCAGAGTATGTTTGGCATAAGAGAGTAGTGCCTGAAGGCGAGGGAGGCATCAATCACATTGACTTTGCGGTTGCAAGACCAGTTGTTGACTACCTTGTTAGAAACTATCACGGTACTCAACCCGTTCACGCTATTGGCCTACTATTCGCTGGGAGTAGCTCGATAACAGTTGTCTGCAAATGTAAGCACATCTATAATGAGGGCTATAGGTTCATAGATTTCACGGGAGCTGAGATGAAGTGTGTAGACCCCCTCGATGATGAGGTAACGTTGAGTGCAACGAAGGAGGGAAGGACAACGGGATATCACGGAAACATTATAACTGACGAGAGTGCTGCTGTCAGGGTTAATTATGGAGGCTTTACAGCGTATTTCGAGGATGTGATATTCTTTAGAAACCCCTTCGGGCAACCCGGGGACTCGGGTTCATTTGTCTTTATCCCAGATGCATCATTTGACTGA

Tertiary structure

PDB ID
3a49373ca346b3e59d7a8a0e54f95c4aaf7474542717c69aea7aa1de32c730d5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9182
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Archaeal virus with exceptional virion architecture and the largest single-stranded DNA genome Mochizuki,T., Krupovic,M., Pehau-Arnaudet,G., Sako,Y., Forterre,P. and Prangishvili,D. 2012 22826255 GenBank