Protein

View in Explore
Genbank accession
XCP73868.1 [GenBank]
Protein name
tail sheath
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MAIKSSPGMISGMQPLNTITGEEFVEVIRREPDGSYKNFRLMVSKIRNNEGLSAYEVAVKNGFVGTEQQWLESLKGQGIYQLALQQGFVGTEDEFLASLKGDDGKDGAVGKSIYEVAVDNGYTGTEQEFLATLVGKSAYQSALDTGFTGTEAEFVASLKGEKGDTGDKGDKGDKGDTGTDGKSAYALAVEGGFTGTEAEYLESLHGVDGTKGDDGVDGADGKSAYELAVDAGFQGTEAEYLESLHGADGKSAYQIAKDGGFVGTEEQWLESLEGANGKSAYESAVDGGFIGTEEEFNKSLAEPKGVNGGVFITDITPVNAADNVGDKVKSADGFSLVQCSSSTRDVKVKVAAITGHTNYRPVVKVNGVDVALTAGANAPMWTGEATVNLPAPVGADPVKVEATHEDGAKAAANVTMDSAPVITAATFTGNYPGAQTELKAGDVMSITFTSDQDVVGYEIRDEGAFVAKTGTLTAGKTHNVTGLVIADRGNTAANHPFSIRVKKASGSFSAWYKSDVAGTVEKVNVVKLNNLKPTISFGTVTYPAGQQAVKAGEDATVANTVTNASSATYTSANGQLTVTNPTQVEAAKTVSYLAGDYNDLTNNLTITAQRAANGSSATASTIVKIANVAPELTVTTPAARLRSGGNAGTVVQRHTITITSTQSLAEAPSMDAPGGNWDAAAWVGDAAKKVWTRTLLVHDNDAKGIFNFAGVSGKGLAGVAVNALKSGGEYTIGGFVLRTMSIAAFPNREGAIGTTVTMTGKLRCSNLSKGASGSLNFTYKADDADAVNTYTVKNGNSWYNCDAANSVSNTSGLMRVELEEVV
Physico‐chemical
properties
protein length:822 AA
molecular weight: 85149,13370 Da
isoelectric point:4,80195
aromaticity:0,07056
hydropathy:-0,23236

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage HPP-Temi
[NCBI] 		3234043 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCP73868.1 [NCBI]
Genbank nucleotide accession
PP968062 [NCBI]
CDS location
range 155871 -> 158339
strand -
CDS
ATGGCCATTAAATCCAGTCCGGGCATGATTTCCGGAATGCAGCCTCTTAACACCATCACTGGTGAAGAGTTTGTAGAAGTTATTCGTCGTGAGCCCGATGGTTCTTATAAGAACTTCCGTCTCATGGTCTCCAAGATCCGCAACAACGAAGGTCTCTCGGCCTACGAGGTTGCTGTTAAGAATGGTTTCGTTGGCACTGAACAACAGTGGCTCGAAAGCCTGAAAGGTCAAGGTATTTATCAGCTTGCTCTCCAGCAAGGTTTCGTAGGTACCGAAGACGAATTCCTCGCTTCCCTCAAGGGCGATGACGGTAAAGATGGTGCCGTAGGTAAATCCATCTATGAAGTAGCTGTTGATAATGGCTACACCGGCACTGAACAAGAATTCCTTGCAACTCTCGTTGGTAAATCTGCTTATCAATCCGCCCTGGATACCGGTTTCACTGGTACCGAAGCTGAGTTCGTTGCCTCGCTGAAAGGTGAGAAAGGCGACACCGGTGATAAAGGGGACAAAGGCGATAAGGGTGATACTGGCACCGATGGTAAGTCTGCCTATGCTCTCGCAGTAGAAGGTGGTTTCACTGGTACCGAAGCTGAGTACCTGGAATCCCTACATGGCGTTGACGGCACCAAAGGTGATGACGGTGTTGATGGTGCTGACGGCAAGTCCGCTTATGAACTGGCAGTTGATGCTGGTTTCCAAGGCACCGAAGCTGAATATCTCGAAAGCCTTCACGGCGCTGATGGTAAGTCCGCTTATCAGATCGCTAAAGATGGCGGCTTTGTGGGCACTGAAGAACAATGGCTGGAAAGCCTTGAAGGTGCTAATGGTAAGTCGGCATATGAATCCGCTGTAGACGGTGGCTTCATCGGTACTGAAGAAGAGTTCAACAAATCCCTGGCTGAACCGAAAGGCGTTAACGGTGGTGTATTCATCACTGACATCACTCCGGTAAACGCTGCTGACAACGTTGGCGACAAAGTTAAGTCGGCTGATGGCTTCTCCCTGGTACAGTGCTCCTCGTCCACTCGTGACGTTAAGGTAAAAGTCGCTGCTATCACTGGCCACACCAACTATCGTCCGGTTGTTAAAGTAAACGGTGTTGATGTTGCACTGACCGCCGGCGCTAATGCTCCGATGTGGACTGGTGAAGCAACTGTCAATCTGCCGGCTCCGGTTGGCGCAGATCCGGTTAAAGTAGAAGCTACTCACGAAGACGGCGCTAAGGCTGCTGCTAACGTGACTATGGATTCTGCTCCTGTAATCACTGCCGCTACCTTCACTGGTAACTATCCGGGTGCACAGACCGAACTGAAAGCCGGTGACGTAATGTCCATCACCTTTACTTCTGACCAAGATGTTGTTGGTTATGAAATCCGTGATGAAGGTGCATTCGTTGCTAAGACTGGTACTCTGACTGCCGGTAAGACGCACAACGTTACTGGTCTGGTTATTGCCGACCGTGGTAACACCGCTGCCAACCATCCGTTCAGCATCCGTGTTAAGAAAGCTTCCGGTAGCTTCTCTGCTTGGTATAAGTCCGATGTGGCTGGTACTGTTGAGAAAGTTAACGTCGTTAAGCTGAACAACCTGAAGCCGACTATCTCCTTCGGTACTGTAACTTACCCGGCTGGCCAACAAGCCGTCAAAGCTGGTGAAGATGCAACCGTAGCGAACACTGTAACTAACGCTTCCAGCGCTACTTACACCTCGGCAAATGGTCAGCTGACTGTAACCAATCCGACCCAAGTAGAAGCAGCTAAAACTGTTAGCTATCTGGCAGGTGATTACAATGACCTGACTAACAACCTGACTATCACTGCACAACGTGCTGCCAACGGTAGCTCCGCAACTGCGTCCACGATCGTTAAGATCGCTAACGTTGCTCCGGAACTGACTGTCACTACTCCGGCTGCTCGTCTGCGCTCCGGTGGTAATGCAGGTACTGTTGTTCAGCGTCACACCATCACCATCACCTCTACTCAGTCTCTGGCTGAAGCACCTTCGATGGATGCTCCTGGCGGAAATTGGGATGCTGCGGCATGGGTTGGTGATGCAGCCAAGAAAGTATGGACACGTACCCTGCTCGTTCATGATAACGATGCCAAGGGTATCTTCAACTTTGCTGGTGTATCGGGTAAAGGCCTTGCTGGTGTTGCTGTCAACGCACTGAAGTCTGGTGGTGAATACACCATCGGTGGTTTCGTTCTGCGTACCATGTCTATTGCTGCTTTCCCTAACCGTGAAGGTGCTATTGGTACCACCGTGACCATGACTGGTAAGTTGCGTTGCTCTAACCTGTCGAAAGGTGCCAGCGGCTCTCTGAACTTCACCTATAAAGCTGACGATGCCGACGCTGTAAACACTTACACCGTCAAGAATGGCAATAGTTGGTATAACTGCGACGCCGCTAACTCCGTATCTAACACATCCGGTCTGATGCGCGTTGAACTTGAGGAAGTTGTATAA

Tertiary structure

PDB ID
08b6c003e2923095657053b8c3e6ed64b506e978edf0186a0f00f48cd2c417dd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2958
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of Pseudomonas phage HPP-Temi Olorundare,O.O., Agu,C.G., Kabantiyok,D., Ogundeji,A., Dung,T., Zrelovs,N., Svanberga,K., Jansons,J., Kazaks,A., Morenikeji,R.O. and Pewan,B.S. 2024-10-25 — GenBank