Protein

View in Explore
Genbank accession
WPK38606.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MANEIGTATNFEDFFSKIVAFLTTNATLVAAGQAWQALRVRRDNIDTYTTSLPDSFTGNGRKQIHTFRYDPRSLNTNNPASNGSESFWYTNSGFSAGSSYGQWKLRQAREVKTVRIKAPIGSSYASYAPKSFRLQYSDDGTAWTTALTVSNAPNWSAGERRDFAVPGTPGSHLYWKIIWDATQVVSYIGWQELLLLEADGTVANHFGSEVILKALGNSGLDEIYTGIRAEYDSAAGWYNLFMNGYTGYDANEMSWFNQPGALPGYGAQYTRATPMVPLWNTTMPYWMVASGRSFRFCVKVGTNYEGGYLGFILPYATPNQYPYPLAVGGSLCPVNDSSRSAEWRYSYVSFAHGVYPGPGTQNYPESEANWATLYLRSPEGAWNYHGNRSSYGSSNSEGIGGPTVSSSPPYNVGINNAGLRNVWPHCMNGQWSSGLRPYRECLGGGYILQPCVLIQRSPAQVLGELEGTFAISGYQNSAENTTVFNGKTHVVFQNAYRNTIHEHWALSMD
Physico‐chemical
properties
protein length:509 AA
molecular weight: 56232,61980 Da
isoelectric point:6,51604
aromaticity:0,14145
hydropathy:-0,40530

Domains

Domains [InterPro]
G3DSA:2.60.120.260
70–187
G3DSA:2.60.120.260
IPR008979
82–152
IPR008979
PF22633
83–163
PF22633
WPK38606.1
1 509
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Aergia
[NCBI] 		3092174 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK38606.1 [NCBI]
Genbank nucleotide accession
OR805291 [NCBI]
CDS location
range 17079 -> 18608
strand +
CDS
ATGGCAAACGAAATCGGAACCGCGACGAACTTTGAGGACTTCTTCAGCAAGATCGTCGCCTTTCTTACCACGAACGCGACCCTGGTGGCGGCGGGTCAGGCTTGGCAGGCGCTGCGCGTCCGCCGGGACAACATCGACACATACACCACCAGCCTCCCGGACTCCTTCACGGGTAACGGTCGGAAGCAAATTCACACCTTCCGCTATGATCCGCGGTCGCTGAACACGAACAATCCCGCCTCGAACGGTTCGGAGTCCTTCTGGTACACCAACTCAGGCTTCTCCGCCGGGAGCAGCTACGGTCAATGGAAACTGCGACAGGCGCGCGAAGTCAAGACCGTGCGCATCAAGGCCCCCATCGGGTCCAGCTACGCAAGCTATGCCCCCAAGTCCTTCCGGCTCCAATACTCGGATGACGGAACCGCCTGGACTACGGCCCTGACCGTCTCGAACGCGCCGAACTGGTCCGCCGGGGAGCGGCGGGACTTCGCCGTGCCCGGCACTCCCGGTTCGCACCTGTATTGGAAGATCATCTGGGACGCGACCCAGGTGGTGAGCTACATCGGGTGGCAGGAACTCCTCCTGCTCGAAGCGGACGGGACGGTTGCCAACCACTTTGGGTCGGAGGTCATCCTAAAGGCCCTGGGCAACTCGGGCCTGGACGAAATCTACACCGGCATCCGGGCGGAGTACGACAGCGCAGCGGGTTGGTACAACCTGTTCATGAACGGGTACACTGGCTATGACGCCAACGAAATGTCTTGGTTTAACCAACCGGGAGCCCTCCCGGGATACGGGGCGCAATACACTCGGGCAACCCCGATGGTGCCGCTGTGGAACACCACCATGCCGTACTGGATGGTGGCTTCGGGCCGCTCCTTCCGGTTCTGCGTCAAGGTCGGTACGAACTATGAGGGGGGCTATCTTGGTTTCATTCTCCCGTATGCTACGCCCAATCAATACCCGTACCCGCTCGCTGTCGGTGGTTCCCTCTGCCCCGTCAACGACAGCTCCCGGTCCGCGGAGTGGCGTTATTCATACGTGAGCTTCGCCCACGGCGTGTATCCCGGGCCGGGCACTCAGAACTACCCGGAAAGCGAAGCGAACTGGGCGACCCTTTACCTGCGCAGCCCGGAAGGAGCGTGGAACTACCACGGCAACCGTTCGTCCTACGGTTCGTCCAACTCCGAAGGCATAGGTGGTCCGACCGTTAGCAGCTCGCCTCCATACAACGTCGGCATCAACAACGCCGGTTTGCGCAACGTCTGGCCTCACTGCATGAACGGCCAGTGGTCCTCGGGCCTGCGCCCCTACCGCGAGTGCTTGGGCGGCGGGTATATTCTCCAGCCTTGCGTGCTGATTCAGCGGTCGCCTGCCCAAGTCCTCGGGGAGCTGGAGGGGACGTTTGCAATCAGCGGCTACCAAAACAGCGCGGAGAACACGACCGTGTTCAACGGCAAGACTCACGTGGTGTTCCAGAATGCTTACCGCAACACGATCCACGAGCACTGGGCGCTGTCGATGGATTGA

Tertiary structure

PDB ID
b0b90f15c58715ba15f5054ee309f6b94abcfcbeda85857e93138d00f4573b92
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6358
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage Paride can kill dormant, antibiotic-tolerant cells Maffei,E., Harms,A. and Humolli,D. 2024 38168031 GenBank