Protein

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Genbank accession
YP_010843619.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MAIKLRDAEGNLTPEGVKELERVRETVKDKVYELRDLGMSHAEVDYMFFAEVDLCNLRYSRERRR
Physico‐chemical
properties
protein length:65 AA
molecular weight: 7748,77130 Da
isoelectric point:5,81124
aromaticity:0,07692
hydropathy:-0,73385

Domains

Domains [InterPro]
Coil
17–37
Coil
YP_010843619.1
1 65
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage WIL-1
[NCBI] 		1541821 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Listeria monocytogenes
[NCBI] 		1639 Bacteria > Firmicutes > Bacilli > Bacillales > Listeriaceae > Listeria

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010843619.1 [NCBI]
Genbank nucleotide accession
NC_025440.1 [NCBI]
CDS location
range 15645 -> 15842
strand +
CDS
ATGGCTATTAAATTAAGAGATGCGGAAGGTAATCTAACTCCCGAAGGTGTTAAAGAACTAGAACGTGTAAGGGAAACTGTAAAAGATAAAGTATATGAGTTAAGAGACTTAGGGATGTCCCATGCGGAGGTAGACTATATGTTCTTTGCAGAAGTAGACCTTTGCAACCTAAGATATAGTAGAGAGCGGAGGAGATAA

Tertiary structure

PDB ID
1f9d1cab94d24d65f48e72c574143c6f82d8997f9aa56f33a7a100a09e994aa9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8667
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequencing of lytic Listeria phages isolated from washing water of food industry Silva-Castro,G.A., Rodriguez-Calvo,A. and Calvo,C. 2022-08-18 — GenBank