Protein

View in Explore
Genbank accession
QOC57615.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALVSQNVKNLKGGISQQPDILRFPEQGAEQINGWSSETEGLQKRPPMVFTKTLGGKGSLGTWPYIHLINRDENEQYYAAFTGQGIRVFDLSGKEYAVRGNLDYVRCNSPRDELRMVTVADYTFITNRNYVCRSAGQLSDNGAFRADGDALINVRGGQYGRTLQVAFNGALRASYTIPDGSQKEHVTNTDAQWLAEELARQIREKTPGWEINVGPGFIHIKAPGNDHIWDLWTKDGYADQLINSVSHYVQSFNKLPLQAPAGYSVQIVGDTSKTADRYYVYFDWERKVWTERSGWNIRYTFDGNTMPHALVRTSDGNFELQTLPWTNRNSGDDDTNPYPSFIDSTVNDIFFFRNRLGFLSGENIVLSRTSKYFSFFPPSVANLSDDDPIDVAVSHNRVSTLKYAVPFTEELLLWSDEAQFVLSANGILSARSVELNLTTQFDVQDRARPYGIGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPSYIPNGVFDIHGSSTENFASILTGGAESKVFIYKFLYLDEEIRQQSWSHWDFGEGARVLAASSIGSTMFLVIENDFNVFMGYVQFVKNTIDIAGEPYRVFLDAKTTYTIPAGTYNDDTYLTTIDLRTIYGMNFRRGTISVVEPDGRVEVFEEPEGGWNNDPFLRFNGNTEGRRLVVGFNIPFRYEFSKFLIKQTADDGSTNTEDSGRLQLRRAWVNYENSGAFTIEVENQSRLFSYDMAGGRLGSENLRVGRLNLGTGQYRFPVPGNAKYNTVRIVSDNTTPLNVIGCGWEGNYNRRSSGI
Physico‐chemical
properties
protein length:792 AA
molecular weight: 89242,10190 Da
isoelectric point:5,35954
aromaticity:0,12626
hydropathy:-0,43914

Domains

Domains [InterPro]
IPR058003
1–792
IPR058003
QOC57615.1
1 792
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEp_SNUABM_03
[NCBI] 		2772015 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOC57615.1 [NCBI]
Genbank nucleotide accession
MT822284 [NCBI]
CDS location
range 14581 -> 16959
strand -
CDS
ATGGCCTTAGTAAGTCAAAACGTGAAGAACCTGAAAGGTGGCATCAGCCAGCAGCCAGACATTCTTCGCTTCCCGGAACAGGGAGCAGAACAAATCAATGGTTGGTCCTCTGAAACTGAGGGTCTCCAGAAACGTCCACCAATGGTGTTCACCAAGACGCTGGGCGGTAAGGGTTCCTTGGGAACATGGCCTTACATCCACCTGATTAACCGTGACGAGAACGAACAGTACTACGCGGCGTTTACCGGGCAGGGAATCCGCGTGTTCGACCTCAGCGGTAAAGAGTACGCTGTGCGAGGTAACTTGGACTACGTGAGGTGTAACAGTCCACGTGATGAGCTGCGCATGGTGACGGTGGCGGACTATACGTTCATCACCAACCGTAACTACGTCTGTAGGTCTGCGGGACAACTCAGTGACAACGGTGCGTTTCGAGCAGACGGTGACGCGTTGATTAACGTGCGCGGTGGGCAGTATGGGCGTACCTTGCAGGTTGCCTTTAATGGAGCGCTGCGGGCATCCTATACGATTCCTGATGGTTCTCAGAAGGAGCACGTGACCAATACGGATGCCCAATGGTTAGCCGAAGAGTTGGCCCGTCAGATTCGCGAGAAGACTCCGGGCTGGGAGATTAACGTTGGTCCGGGATTCATCCACATCAAGGCACCCGGAAATGACCATATCTGGGACTTGTGGACCAAGGATGGCTATGCCGACCAGTTAATCAACTCAGTGTCACACTACGTACAGTCGTTCAATAAGTTGCCCTTACAGGCACCCGCTGGTTACTCCGTACAGATTGTGGGTGATACCTCAAAGACGGCTGACCGCTACTACGTGTACTTCGATTGGGAACGTAAAGTGTGGACCGAGAGAAGCGGCTGGAACATCCGGTATACCTTCGATGGGAACACAATGCCTCACGCCTTGGTGCGTACGTCTGACGGTAACTTTGAGTTGCAAACTCTTCCGTGGACCAACCGTAACTCTGGTGATGATGATACGAACCCGTACCCCAGCTTCATCGACTCGACCGTAAACGACATCTTCTTCTTCCGTAATCGCCTTGGCTTCCTGAGTGGTGAGAACATCGTGCTCTCGCGTACCTCTAAGTACTTCTCGTTCTTCCCGCCTTCTGTGGCAAACCTCAGCGACGATGACCCTATCGACGTAGCTGTGAGTCACAACCGTGTGTCAACCTTGAAGTATGCCGTACCGTTTACCGAAGAGTTGCTCTTGTGGTCTGACGAAGCACAGTTCGTGTTGAGTGCGAATGGTATCCTGTCCGCTCGTTCCGTAGAGTTGAACCTGACGACACAGTTCGATGTGCAGGACCGCGCTCGTCCGTATGGTATTGGTCGTAATGTTTACTTCGCGTCTCCTCGCGCTTCCTTCACGTCCATCAACCGTTACTATGCGGTGCAGGATGTGTCCAGCGTTAAGAATGCAGAGGACATGACGGCTCACGTTCCAAGTTACATCCCGAATGGTGTGTTCGACATCCACGGCTCCAGCACGGAGAACTTCGCGTCAATCCTTACGGGAGGCGCTGAGTCCAAGGTGTTTATCTACAAGTTCCTCTATCTGGATGAAGAGATTCGCCAGCAGTCGTGGTCTCATTGGGACTTCGGTGAGGGTGCCCGTGTACTGGCTGCGTCAAGTATTGGCTCGACGATGTTCTTAGTGATTGAGAACGACTTCAACGTCTTTATGGGGTACGTACAGTTTGTTAAGAACACCATTGACATTGCGGGTGAGCCTTACCGTGTGTTCTTGGACGCCAAGACAACCTATACGATTCCAGCGGGTACATACAACGATGATACCTACCTGACGACAATCGACCTTCGTACCATCTACGGTATGAATTTCCGTCGCGGTACAATCTCCGTGGTAGAACCTGATGGGCGCGTTGAGGTGTTTGAGGAGCCGGAGGGTGGCTGGAACAATGACCCGTTCTTGCGCTTCAACGGTAACACCGAGGGCCGCAGGCTGGTTGTTGGGTTTAACATCCCGTTCCGTTACGAGTTCTCTAAGTTCCTCATTAAGCAGACCGCTGATGATGGCTCGACGAACACAGAGGACAGTGGACGCTTGCAGCTTCGCCGTGCGTGGGTCAACTACGAGAACTCCGGTGCGTTCACCATTGAGGTGGAGAACCAGTCTCGTCTGTTCAGCTACGATATGGCTGGTGGTCGGCTCGGGAGTGAGAACCTCCGAGTGGGTCGCTTGAACCTCGGTACGGGTCAGTATCGTTTCCCTGTGCCCGGTAACGCCAAGTACAACACTGTGCGAATCGTCTCGGACAACACAACGCCTCTGAACGTGATTGGCTGCGGCTGGGAAGGTAACTACAATCGCCGGTCTTCCGGTATCTAA

Tertiary structure

PDB ID
2999b54b9827c1677c4d35655cbbbe5e83376f68e37412a4c88bcc01a28034a1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2354
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of novel Erwinia phage pEp_SNUABM_03 Kim,S.G. and Park,S.C. 2021-01-07 — GenBank