Protein

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Genbank accession
QTZ82849.1 [GenBank]
Protein name
BppU family baseplate upper protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence Phold
Probability 1,00
Protein sequence
MKEIIINVDAYNENSIRTVEGDNLSEVYKIYICKNKRRIDLTNKIAVMAYVNEYGSKKSNILALNITNAAEGEIELPITNVISNENGVYACQIAIYGENNSLEQTAPFSLIVENNIFSKISNTAINSTDFHILSEAIKTTNAYCEKLKEGTENIELQYANKLNEKLDKDGIVTMANMGQDVKEAMTGGSVAVVGRNSVLKENIVDGQVSIEKLDPILSDTINKDSWEILSPHLTDWSIDDSDKKLIINGITRLYVKTNNDEGFPKRIAHTGSLEIPSQSCAYVNLTLSKDEYNIQVTDNMYSLPVKSIILFSNYYGIIGGAMAGHLITKDYKKDIDNLSKKLELDTKTNITWFKMDTKPVHWNEESKTLTWEGDLVAVLGYAPPYFKNRIKVASGSHTFKDTAYSVMYLDITDVSSDDLNEPTCIKSGNYFTEDGYTPSPTSIPIAKYNANDGGFKLINFVDLDTVNTDNVPEELSLDTNVYLKVTKDKLEIYRQCFNKEYYTCQTFAHFVSSDSDCDIWKLAEVYICKKNELDFTLAFEQPLVINGEWECAIKEEGQPDFIGGLIHGDEHMEEIKVIVDGSPIDLSNYKTYICNNITIIETSSLYRCNSKKNEKVATHGKKYSIDFKKLIVGQVINWEKSLSLESSYLCMLPVARQYIGTETYITSEGATDFDYKVLDLIKNHSNIDRKKGVKYAEIWNKEKGYQFYARVKTLESNNLEENAFFFANAPQYNKFYFDYCGNNYNTQIGEVWKNESEYVYNFKGFIQ
Physico‐chemical
properties
protein length:767 AA
molecular weight: 87063,15070 Da
isoelectric point:4,97258
aromaticity:0,10691
hydropathy:-0,39844

Domains

Domains [InterPro]
G3DSA:2.60.40.3350
3–119
G3DSA:2.60.40.3350
IPR018913
12–122
IPR018913
QTZ82849.1
1 767
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiCp-B
[NCBI] 		2814703 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QTZ82849.1 [NCBI]
Genbank nucleotide accession
MW478290 [NCBI]
CDS location
range 16860 -> 19163
strand +
CDS
ATGAAAGAAATAATAATAAATGTAGATGCTTATAACGAAAATTCTATAAGAACTGTTGAGGGGGATAACCTGAGTGAAGTATATAAAATATATATCTGTAAAAATAAAAGAAGAATAGATCTAACAAATAAGATAGCTGTTATGGCATACGTTAATGAGTATGGAAGTAAAAAAAGTAACATCTTAGCATTAAATATTACTAATGCTGCTGAAGGTGAAATTGAATTACCTATAACAAATGTAATTTCAAATGAAAACGGAGTATATGCTTGTCAGATTGCTATCTATGGAGAAAATAATTCTTTAGAACAAACAGCTCCATTTTCTTTAATAGTAGAAAATAATATATTTTCTAAAATATCTAATACTGCAATAAACTCTACTGATTTTCATATTTTAAGTGAAGCGATAAAAACTACAAATGCATATTGTGAAAAACTCAAAGAAGGAACTGAAAATATAGAGTTACAGTATGCTAATAAATTAAATGAAAAACTAGATAAAGATGGAATTGTGACTATGGCAAACATGGGTCAAGATGTAAAAGAAGCTATGACAGGTGGAAGTGTTGCGGTAGTCGGTAGAAATTCTGTTCTTAAAGAAAATATAGTAGACGGGCAGGTTAGCATTGAGAAACTTGATCCAATTTTAAGTGATACTATAAATAAAGATAGTTGGGAGATTCTATCTCCACATTTAACAGATTGGAGTATTGATGATAGTGATAAAAAACTTATTATTAATGGTATAACTAGATTATATGTAAAAACTAATAATGATGAAGGTTTTCCTAAAAGAATAGCCCATACAGGTTCTTTAGAAATTCCTAGCCAGTCATGTGCGTACGTAAATTTAACTCTAAGTAAAGACGAGTATAATATACAAGTGACTGATAATATGTATTCTTTACCTGTTAAGAGCATAATTTTATTTTCTAACTATTATGGGATAATAGGAGGAGCAATGGCAGGACACCTTATAACTAAAGACTATAAAAAAGATATAGATAATTTGAGTAAAAAACTAGAATTAGATACAAAAACTAATATTACATGGTTTAAAATGGATACTAAGCCTGTACATTGGAATGAAGAAAGTAAAACTTTAACATGGGAAGGAGATTTAGTGGCAGTATTAGGATATGCACCACCATACTTTAAAAATAGGATTAAAGTAGCAAGTGGAAGTCATACATTTAAAGATACTGCTTACTCTGTTATGTATTTAGACATCACAGATGTAAGCAGTGATGACCTTAATGAACCTACTTGTATTAAAAGTGGTAATTATTTTACAGAAGACGGATATACTCCTAGTCCTACTAGTATTCCAATAGCTAAATACAATGCAAACGACGGAGGGTTTAAATTAATAAACTTTGTGGATTTAGACACTGTAAACACTGATAATGTACCTGAGGAACTAAGTTTAGATACAAATGTTTATTTAAAAGTAACCAAAGATAAATTAGAAATTTATAGACAATGTTTTAATAAAGAATACTATACTTGTCAAACATTTGCTCACTTTGTTTCAAGCGATTCAGATTGTGATATTTGGAAGTTAGCCGAGGTATACATTTGTAAGAAAAATGAGTTAGATTTTACTTTAGCATTTGAACAACCCCTAGTTATAAACGGAGAGTGGGAATGTGCTATAAAAGAAGAGGGGCAACCCGACTTTATAGGTGGGTTAATACATGGTGATGAACATATGGAAGAAATAAAAGTTATAGTTGATGGTAGCCCAATAGATTTGAGTAATTATAAAACTTATATATGCAATAACATAACTATAATAGAAACTAGTAGCTTATATAGATGTAATAGTAAAAAAAATGAAAAAGTTGCTACTCATGGGAAAAAATATTCAATAGACTTTAAAAAATTAATAGTTGGACAAGTAATAAACTGGGAAAAATCTTTAAGCTTAGAAAGTAGTTACTTATGTATGCTTCCTGTCGCTAGACAATATATAGGAACAGAAACTTACATTACATCAGAAGGAGCAACCGATTTTGATTACAAGGTGCTAGATTTAATAAAAAATCACTCCAATATAGATAGAAAAAAAGGAGTAAAATACGCAGAGATTTGGAATAAAGAAAAAGGATACCAATTTTATGCTAGAGTTAAAACATTGGAAAGTAATAATTTAGAAGAAAATGCGTTTTTCTTTGCTAACGCCCCTCAATATAACAAATTTTACTTTGATTATTGCGGAAATAATTATAATACACAAATAGGGGAGGTTTGGAAAAATGAAAGCGAATATGTTTATAATTTTAAAGGATTTATACAATAA

Tertiary structure

PDB ID
c3b01de930b4e7faa112bf2210529fc568bbebd31e3be4da00d51f9cddd397ed
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6547
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of four temperate phages infecting Clostridium perfringens and evidence of pseudolysogeny involving large plasmid-like prophages Allen,M.-M., Sbaghdi,T., Garneau,J.R., Duclos,A., Alix-Pare,O., Gaucher,M.-L., Labrie,S.J. and Fortier,L.-C. 1990-11 — GenBank