Protein

View in Explore
Genbank accession
AUG88489.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,51
TF
Evidence Phold
Probability 1,00
Protein sequence
MSSRGQFIGSGADAGIYQPRPVPAESDQLATYINDELLQLGGRFNEVLEGGAFPPSSEMPQRWKDGQMVYFTKALDDTYPNGPYKGQKIVPSPGVYLYKDGREVGDPEPEDGSVEGRWWKIIDDPSSIQTQRFVYQFGNETTPETPPRGPGNPPTGWELSPPKKDNKGQYIWASEQLSVTEDLIYEWGDPIIWSGGVADGGEGVGTEQRFIAWPEGPAPTFSNPNDRYPRTPGGELYTLTIPPVDPPDSVYVYVTSGRIGAETDLLKSPWSNPVPYSTPDTTTIHRVWATGEEWGDPYPSFDPNGNPTPGNGWTDSVPPLSNDYPQWVSDRLEWRGNGAPQTVWTTPTYWNAQKGDKGDVGLPGGTGTAWITINGTQWGDLTATNTIVNTFGRDPIVWDVVTVKDVNSDYSEAKRWDGSAWIYDPNIIDGSLVVDGTIIGSAIKASTQIRIGGADAGGNPNYMVVLDGNPSEPYLMFAGHPDGSLANFTIDKNGNMNAKNAIFNGNITTGSTITGGTINGGQITSSNGNFTVDTAGNMTCQNATINGDLIGDIGNGGNARLIGSEVHVPTQIAKPTGNFTGFHVYSDGSTYIGSDAIIQGSVYAERIVGDITSAVLKSNDAFKQGYLAAGVWRTMREIVTVEHNRPYDRHLKIGVTERPQGFCISCDSQGYGDQFFYARLINIDTGYVAWEKSFNVNLQRFFTVDILTIITSVPSNTGAGTYELQVKCNRNIDGIQYMYDAYSADTSGAVQTLLEAVLFKDSGELS
Physico‐chemical
properties
protein length:766 AA
molecular weight: 83110,66360 Da
isoelectric point:4,46910
aromaticity:0,10574
hydropathy:-0,46410

Domains

Domains [InterPro]
IPR057549
346–446
IPR057549
AUG88489.1
1 766
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Vp_R1
[NCBI] 		2059867 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUG88489.1 [NCBI]
Genbank nucleotide accession
MG603697 [NCBI]
CDS location
range 86731 -> 89031
strand +
CDS
ATGAGTTCTCGTGGTCAGTTTATAGGTTCAGGTGCAGATGCAGGTATTTACCAGCCTCGACCAGTACCAGCTGAATCTGACCAATTGGCTACTTACATCAATGACGAACTTCTGCAATTAGGTGGACGTTTTAATGAGGTCCTGGAGGGAGGGGCTTTCCCTCCTTCTAGTGAAATGCCTCAGAGATGGAAAGATGGTCAAATGGTTTATTTCACAAAAGCCTTAGATGACACTTATCCGAATGGCCCATACAAGGGTCAAAAGATTGTACCATCACCAGGTGTTTATTTGTACAAAGACGGAAGAGAGGTAGGTGACCCAGAGCCGGAGGACGGTTCAGTTGAGGGGCGTTGGTGGAAGATAATCGATGACCCTTCATCTATTCAGACTCAAAGGTTTGTTTACCAGTTTGGTAATGAAACTACTCCAGAAACCCCACCTAGAGGTCCTGGAAATCCACCAACTGGATGGGAACTGTCTCCTCCTAAGAAAGATAACAAAGGACAATACATTTGGGCTTCTGAGCAACTATCTGTTACAGAAGATCTTATTTATGAATGGGGTGACCCAATTATTTGGTCTGGTGGTGTTGCTGACGGTGGGGAAGGTGTTGGGACAGAGCAAAGATTCATAGCTTGGCCTGAAGGCCCTGCTCCTACGTTCAGTAACCCTAATGACAGATACCCAAGAACCCCAGGCGGTGAATTATACACTCTCACAATACCTCCTGTAGACCCACCTGACTCAGTATATGTCTATGTTACTAGTGGCAGAATTGGTGCTGAGACAGATTTACTTAAAAGCCCATGGTCAAACCCAGTACCATACTCTACACCAGATACAACTACAATACATAGGGTATGGGCTACAGGTGAAGAGTGGGGTGATCCTTACCCTTCTTTTGATCCTAATGGAAACCCTACTCCTGGTAATGGGTGGACTGACAGTGTACCACCATTAAGCAATGATTATCCTCAGTGGGTATCTGACAGACTTGAATGGAGAGGTAACGGGGCTCCGCAAACAGTGTGGACAACACCAACTTACTGGAATGCTCAGAAAGGTGACAAGGGTGATGTAGGTCTTCCTGGTGGAACAGGTACTGCTTGGATTACAATAAATGGTACCCAATGGGGAGACCTGACAGCAACTAACACAATTGTTAACACTTTTGGAAGAGATCCTATTGTTTGGGATGTTGTTACTGTAAAAGATGTAAACAGCGATTATAGTGAAGCAAAAAGATGGGATGGTTCTGCTTGGATATATGACCCCAATATTATTGATGGCTCATTAGTTGTTGATGGTACAATCATAGGAAGTGCCATAAAGGCCAGTACTCAGATTAGGATTGGTGGAGCTGATGCAGGTGGTAACCCTAACTACATGGTTGTACTTGATGGTAACCCTTCTGAACCATACTTAATGTTTGCTGGCCACCCTGATGGAAGCTTAGCTAATTTTACTATTGACAAGAACGGTAACATGAATGCCAAGAATGCTATCTTCAATGGTAATATCACTACAGGGTCTACTATCACTGGTGGTACTATCAATGGTGGACAAATAACATCTAGTAATGGTAACTTTACAGTAGATACTGCTGGTAACATGACTTGTCAGAACGCAACTATCAATGGTGACTTGATAGGTGATATTGGTAACGGTGGTAATGCTAGACTTATAGGTTCTGAGGTGCATGTACCTACTCAGATTGCAAAACCAACTGGGAACTTTACAGGATTCCACGTATATAGTGATGGTTCAACCTACATTGGTAGTGATGCAATAATCCAAGGGTCTGTATATGCTGAGAGGATAGTTGGTGATATTACATCAGCCGTTCTTAAAAGCAATGATGCATTTAAACAGGGTTACTTAGCTGCTGGGGTTTGGAGGACTATGAGAGAAATTGTAACTGTTGAGCACAATAGACCTTATGATAGGCACTTGAAAATAGGAGTTACTGAAAGGCCTCAAGGTTTCTGTATATCTTGTGATTCACAGGGGTATGGTGACCAGTTCTTCTACGCTAGACTTATAAACATCGACACAGGGTACGTTGCTTGGGAGAAATCTTTCAATGTTAATCTTCAGAGATTTTTCACAGTTGATATTTTAACTATAATAACATCTGTACCTTCTAACACAGGGGCTGGCACTTACGAACTTCAGGTAAAATGTAACAGAAATATTGACGGAATACAATACATGTATGATGCATATTCAGCAGATACCTCTGGAGCTGTACAGACCCTATTAGAAGCTGTACTCTTTAAGGACTCTGGGGAACTGTCATAA

Tertiary structure

PDB ID
d152f2c04ace572dc00434a00c8a68341317ee3939ef112ff92ab0c71ab0b157
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6317
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis of a novel phage Vp_R1 lytic to Vibrio parahaemolyticus Ren,H. and Li,Z. 2023-06 — GenBank