Protein

View in Explore
Genbank accession
AXG67453.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MEYKVFDLSLIPQLTRLFASASDDKAAYVISLNTGKTEKDLLTCLNFRPNGAGYYFDVTKLTSDIGVLLGTGNDCTRTLVGNQLNFSKCNITCSAVGKPTHLILGGIIPFSFEIGKDVKLLHVDSGSSVDSTGEGSVVTVNAFGLRLNDIDTIPVSSATIPSIWFRTGYADPPYYQFDDIQTGLMRQIGTGDFEFQTAINYFNGSFAVYPMFSFTSAIGSNNNPVDGLSLYFQYMSNSPQLVRYILTRTYTKSDEIYVSENVPYGATLTLRRVGGVVRLYVNGVQLKLYKQSDTSFSTPVDYSLAFDLSKLSIFRIGQFYLSSPNGAGYGLAQSTINKL
Physico‐chemical
properties
protein length:339 AA
molecular weight: 37180,65220 Da
isoelectric point:5,73360
aromaticity:0,12389
hydropathy:0,01150

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage vB_DsoM_JA33
[NCBI] 		2283032 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXG67453.1 [NCBI]
Genbank nucleotide accession
MH460462 [NCBI]
CDS location
range 47623 -> 48642
strand -
CDS
GTGGAATACAAAGTGTTTGATTTGAGTCTGATTCCGCAGCTAACGCGTTTATTTGCGTCTGCCTCAGACGATAAAGCCGCTTACGTTATTTCACTGAATACAGGCAAGACAGAAAAGGATCTTTTGACTTGCTTGAATTTCAGGCCAAATGGCGCAGGCTATTATTTTGACGTTACAAAACTGACAAGTGATATAGGCGTACTGCTCGGAACAGGAAATGACTGTACGCGCACGCTGGTAGGAAATCAGCTTAACTTTTCGAAATGCAATATCACATGCAGCGCAGTCGGAAAACCTACGCATCTTATTTTAGGCGGTATCATTCCATTCTCTTTTGAGATTGGAAAAGATGTTAAATTGCTCCACGTCGATTCGGGATCTTCTGTAGACTCAACGGGCGAAGGTAGTGTAGTTACTGTCAATGCTTTCGGATTGCGTTTGAATGATATCGACACGATTCCAGTCTCAAGTGCAACGATACCTTCAATTTGGTTCCGTACCGGATATGCAGATCCTCCGTACTACCAATTTGATGATATTCAAACAGGATTGATGCGTCAGATTGGAACAGGTGATTTCGAATTTCAGACAGCGATCAACTATTTCAACGGCAGCTTTGCTGTTTATCCTATGTTCTCTTTTACAAGTGCGATAGGTTCAAACAATAATCCGGTTGATGGTCTTTCTTTGTATTTCCAATACATGTCGAACTCACCGCAACTGGTTCGCTATATCCTTACGCGCACGTATACCAAATCTGATGAGATTTATGTTTCTGAAAACGTTCCGTATGGTGCTACTCTAACTTTGCGTCGCGTTGGAGGGGTAGTTCGTCTGTATGTGAACGGCGTGCAATTGAAACTCTACAAACAAAGCGACACAAGTTTTTCAACTCCGGTTGATTATTCTTTGGCATTCGATTTGTCCAAGTTGAGTATTTTCCGCATCGGTCAATTTTATTTATCTTCGCCTAATGGCGCAGGTTATGGATTGGCTCAATCAACAATAAACAAACTGTAA

Tertiary structure

PDB ID
879d39d147623101c7aaaf12342c9553d1ebf15e96fad1480d51553478a4f834
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4303
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Jumbo Bacteriophages Are Represented Within an Increasing Diversity of Environmental Viruses Infecting the Emerging Phytopathogen, Dickeya solani Day,A.W., Ahn,J. and Salmond,G.P.C. 2018 — GenBank