Protein

View in Explore
Genbank accession
YP_006990327.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TSP
Evidence RBPdetect
Probability 0,50
TF
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MLLTIHDANLRKVAFIDNDKQETLNYYDDTWTRSLETGSSTFEFTVYKKAIKSDTAINKTYNLLNERAFVSFRHNGKSYVFNVMTVEENEQTIKCYCENLNLELINEYANPYKATKAMSFVEYCNAMDLLNFTHLSVGINEISDQKRTLEWDGQDTKLARLLSLAKKFDAEIDFDTQLNADSSIKSFKVNVYYENDDKHQGVGRVRNDIQLTYGKNLKSITRKIDKTGVYNAIRPTGKRTVKNGKGEEVEEIVTIGSLGEWSENNKDGVREFYQQGDMLYAPLSMQMYPSTFTSSTTNDQWIRKDMEVDSDSPSVIRASAIANLRKNAYPALTYEVDGFIDVEIGDTIRIYDEGFTPILLVQARVSHQKISFTNPASNQTTFANFKALENNLSDGIQAAFERLFEASKPYLIKLSTDNGVIFKNQIGQSLVTPSLYRGGKPVVSGVTWRWSLDGTVTTGMTYTVRGADVTDTVTLTVAAYIGNDEVAVDEISFVNVLDGTMGTPGTPGKDGRTPYVHTAWANNSTGTDGFSLDSSVNKLYIGIYTDFEPMDSQDPRKYKWTKIKGDKGDKGDPGQRGLDGLQGEKGEQGLPGAKGADGKTQYTHIAYANSSDGRTDFSTSASNRSYIGMYVDFNSQDSTNPSDYAWTLVKGADGANGIAGKAGVDGRTPYLHIAYATSNNGSQGFSTTDSVNKTYIGTYTDYVQVDSTDYRVYKWTLIKGADGNGIANVTNYYLATTASTGVTRSTAGWTTIPQTITSAKRYHWNYRVELYTDGTSKTTEPAIIGVYGDKGDTGARGIQGIQGVRGEQGIPGEKGADGRTQYTHIAYADNAAGGGFSQTDQTKAYIGMYQDFNATDSNNPNSYRWTKWKGSDGAQGIPGPKGADGRTPYVHFAYSDNADGTGLTTSDNGQRYIGHYSDYTQADSTDKTKYRWADRWAKIEVGGRNYIRNFGFTDSSYTLNNANSQWRYERIADPTSRSGYHIKATCTQAGSGGFHRPFVDLRGAHWQGRTMTYAVDVKCSRAVTIAIGAEAIESGMKDQSVSTEWQRFAVTGKVKHISTWSFVFYIRNSQWQVGDVVYIRDPQLEDGTVATTPSSAPEDIENQIDSKADQALTQEQLNSLNERAQILDAELKAKASMNALSDLEKAYQSFVKSNADSRAKAESDLAEAGRRIDLLVTQFGGFKELKTFIDTYMSSSNEGLIIGKNDASSTIKVSSDRISMFSAGKEVMYISQGVIHIDNGIFTASVQIGKFRTEQYHLNVDMNVIRYVG
Physico‐chemical
properties
protein length:1269 AA
molecular weight: 140339,58500 Da
isoelectric point:5,64635
aromaticity:0,10481
hydropathy:-0,56856

Domains

Domains [InterPro]
IPR007119
65–382
IPR007119 PTHR24637 Coil
IPR010572
144–386
IPR010572 G3DSA:1.20.5.320 G3DSA:1.20.5.320
YP_006990327.1
1 1269
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage phiNJ2
[NCBI] 		1239381 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus suis
[NCBI] 		1307 Bacteria > Firmicutes > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006990327.1 [NCBI]
Genbank nucleotide accession
NC_019418.1 [NCBI]
CDS location
range 4481 -> 8290
strand -
CDS
ATGCTATTAACAATTCATGATGCAAATCTAAGAAAAGTAGCATTTATTGATAACGATAAACAAGAAACTTTAAACTACTATGATGACACTTGGACACGCAGCCTAGAAACAGGGTCTTCAACTTTTGAATTTACAGTATACAAGAAAGCTATAAAGTCTGATACAGCGATAAATAAAACATATAACTTGCTGAATGAACGTGCTTTTGTCTCATTTAGACACAACGGCAAAAGCTATGTATTTAATGTGATGACTGTTGAGGAAAATGAGCAAACCATCAAATGCTATTGTGAAAACCTAAATCTTGAGCTTATCAATGAATATGCTAACCCATACAAGGCTACTAAAGCCATGTCTTTTGTTGAGTATTGTAATGCAATGGATTTGTTGAATTTCACTCATTTATCCGTTGGTATCAATGAGATTTCGGACCAAAAACGGACTCTAGAATGGGATGGGCAGGATACCAAACTTGCCCGCTTACTAAGTCTTGCCAAAAAGTTTGATGCAGAGATTGATTTTGATACGCAGTTAAATGCTGATAGTTCCATCAAATCATTTAAGGTAAATGTGTATTATGAAAACGACGATAAACATCAAGGGGTAGGGCGTGTCAGAAACGATATTCAGCTAACCTATGGGAAAAATCTTAAATCAATCACACGTAAGATTGATAAAACAGGTGTCTATAATGCTATCCGTCCAACAGGGAAACGAACGGTAAAAAATGGTAAAGGGGAAGAAGTAGAGGAAATTGTAACCATCGGTAGCCTTGGGGAATGGTCTGAAAATAACAAGGATGGGGTGCGTGAGTTTTACCAGCAAGGAGATATGCTCTACGCTCCATTGTCAATGCAGATGTATCCATCAACTTTTACCAGTTCTACCACAAATGACCAATGGATTAGGAAAGATATGGAGGTTGATAGTGATAGTCCATCAGTTATTAGGGCGTCTGCTATTGCAAATCTTAGAAAAAACGCCTATCCTGCATTGACCTATGAAGTGGATGGCTTTATTGATGTTGAAATTGGTGATACTATCAGGATTTATGATGAGGGCTTTACTCCTATTTTGCTTGTACAAGCAAGGGTATCACATCAAAAAATCAGTTTTACCAATCCAGCAAGCAACCAAACAACCTTTGCCAATTTCAAGGCTCTTGAAAACAATCTATCTGATGGTATACAGGCAGCTTTCGAGCGCTTATTTGAGGCATCTAAGCCCTACCTTATTAAGTTATCCACAGACAACGGGGTCATTTTCAAAAATCAGATTGGGCAAAGCCTGGTTACACCGTCCTTGTATCGAGGTGGTAAGCCAGTGGTTTCTGGTGTCACTTGGCGTTGGTCGCTAGATGGTACGGTCACAACTGGCATGACTTACACTGTTCGTGGAGCAGATGTGACAGATACGGTTACATTGACGGTTGCAGCATACATTGGTAACGATGAGGTGGCGGTTGATGAAATTTCCTTTGTCAATGTCTTGGATGGCACTATGGGAACGCCAGGAACGCCAGGTAAAGATGGTCGTACCCCTTATGTACATACGGCATGGGCTAATAATTCAACAGGTACGGATGGATTTTCTTTAGATAGTTCTGTTAATAAACTCTACATTGGTATCTATACTGACTTTGAGCCAATGGATAGTCAAGACCCAAGAAAATATAAATGGACAAAAATAAAAGGCGACAAGGGGGATAAGGGAGACCCTGGACAGCGTGGACTTGATGGCTTGCAAGGAGAAAAAGGCGAGCAAGGGTTACCTGGCGCAAAAGGTGCAGATGGTAAAACGCAGTACACCCATATTGCCTATGCCAACTCTAGCGATGGTCGTACTGATTTCAGTACAAGTGCCTCTAATCGCTCCTATATAGGAATGTATGTGGACTTTAACAGCCAAGACAGTACTAATCCATCTGATTATGCTTGGACACTTGTAAAAGGGGCTGACGGAGCAAACGGTATAGCAGGTAAGGCAGGCGTAGATGGTCGGACGCCATACTTACACATTGCCTATGCCACATCAAATAATGGCTCACAGGGATTTTCAACAACGGATAGTGTCAATAAAACATACATTGGCACATACACGGACTATGTGCAGGTAGACAGCACAGATTACAGAGTCTATAAGTGGACTTTAATCAAGGGGGCAGATGGCAATGGGATTGCCAATGTCACGAACTACTATCTTGCTACCACAGCCTCAACAGGGGTGACAAGAAGTACAGCGGGCTGGACAACTATACCCCAGACAATCACAAGTGCCAAGCGGTATCACTGGAATTACCGAGTAGAACTATACACCGATGGCACAAGCAAGACTACAGAGCCAGCCATTATTGGTGTATATGGTGATAAGGGCGATACTGGTGCGCGTGGTATTCAAGGTATACAGGGTGTCAGAGGTGAGCAAGGCATCCCAGGAGAGAAAGGTGCTGATGGTCGTACTCAATACACTCATATAGCCTATGCAGACAATGCCGCTGGCGGAGGGTTTAGCCAGACAGACCAGACAAAGGCCTATATCGGTATGTATCAGGACTTTAATGCTACCGACAGTAATAATCCAAACTCTTATCGCTGGACTAAATGGAAAGGCTCTGACGGTGCCCAGGGAATACCTGGACCAAAAGGTGCTGACGGTCGTACACCTTATGTGCACTTTGCATACTCTGACAACGCAGACGGCACAGGTCTGACCACGTCTGATAATGGTCAGAGGTACATTGGACACTATTCGGACTATACCCAGGCTGATAGTACGGATAAGACAAAGTATCGCTGGGCTGATAGATGGGCAAAGATTGAGGTTGGCGGACGGAACTACATTCGTAATTTTGGTTTTACCGACAGTAGCTATACTTTAAACAACGCTAACTCACAGTGGCGTTACGAACGAATTGCAGACCCGACATCACGAAGTGGTTATCACATTAAAGCGACTTGTACACAGGCGGGGAGCGGAGGATTCCACCGACCTTTTGTTGACCTACGTGGAGCACATTGGCAAGGTCGTACAATGACCTATGCAGTTGATGTTAAATGTTCACGAGCCGTTACTATCGCAATTGGAGCCGAGGCGATAGAATCTGGGATGAAGGACCAAAGCGTGTCGACTGAGTGGCAGAGATTTGCTGTGACAGGTAAAGTCAAGCACATCTCGACGTGGTCGTTTGTTTTTTACATCCGCAATAGTCAGTGGCAAGTTGGCGATGTGGTCTATATCCGCGACCCACAGCTCGAAGACGGTACTGTTGCAACGACACCATCATCAGCTCCAGAAGACATAGAAAATCAGATTGACTCAAAAGCGGACCAAGCATTGACCCAAGAGCAACTTAATTCACTAAACGAGCGGGCGCAGATACTTGATGCAGAGCTTAAAGCAAAGGCGTCTATGAATGCGCTTAGTGACCTCGAGAAAGCTTATCAATCATTTGTAAAATCAAATGCTGATAGCCGAGCCAAAGCAGAGTCAGACTTGGCAGAGGCAGGCAGACGGATTGATTTGCTTGTTACTCAATTTGGTGGTTTTAAAGAGCTGAAAACATTTATTGATACTTATATGTCAAGTTCTAACGAGGGTTTGATTATCGGTAAGAATGATGCAAGCTCAACCATTAAAGTGTCAAGCGATAGAATTTCCATGTTTTCGGCAGGGAAGGAAGTAATGTATATTAGTCAAGGTGTTATCCATATCGACAATGGTATCTTTACTGCCTCTGTACAGATTGGTAAATTTAGGACTGAACAATATCATCTCAATGTCGACATGAATGTCATACGGTATGTTGGGTAG

Tertiary structure

PDB ID
dc9e62ad599b4c51bd831e99663f63fe121eabd521871eef2fc9ab1a73dd468c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7368
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50