Protein

View in Explore
Genbank accession
WAX24465.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,95
TSP
Evidence RBPdetect
Probability 0,75
TF
Evidence RBPdetect2
Probability 0,53
TF
Evidence Phold
Probability 1,00
Protein sequence
MTGIIVTTPPSVELPPSNVPNAPANLPGVTYQYALLNLPQTWGALQTFPVGTISINGSDIVGTIPVTRFNGGTGASSSTFLRGDGTWATPAGGGGSLTVGTSTISGGTSGRVLYDNAGVLGEYTVSGTGSVALTVSPTFTTPNLGTPSAAVLTNATGLPLSTGVTGNLSVNNLNSGSSASSSTFWRGDGTWATPAGSGVTASGTNIFGGSGAGTSLTSSPQNVLLGSNAGHAITSGSGENIAIGDSAGQAITTGTQNTIVGGLAGAAVTSDTGHTLVGYQAGLVMNGTGSQWNTFIGHASGIRATTAQSCIAVGRAAGQGIVSDNYCTVMGHAAMFLNNGGACNGIIAIGDSAAGADVTSGSSNWAGSGLTYFGAINDTNCNYIGRYTGKSTVAGRTNSHAIGALARIPVRDNAIVLGHAIVAVQTAGRYWDGFQRTDITANAGLTFTIANMNAGLIIRSGTLSGGVNDTTDTAANIVASGPGQNCEVPCSLEFSYGNNTTQTVTVVGGTGVAVSSLGLGGAVAAGALAKFRIIIGNSTSGTESVSLFRVG
Physico‐chemical
properties
protein length:551 AA
molecular weight: 54141,26310 Da
isoelectric point:5,81585
aromaticity:0,05808
hydropathy:0,18330

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Bradyrhizobium phage ppBjS10J-1
[NCBI] 		3003365 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WAX24465.1 [NCBI]
Genbank nucleotide accession
OP596615 [NCBI]
CDS location
range 10953 -> 12608
strand -
CDS
ATGACCGGAATCATCGTCACCACGCCGCCATCTGTCGAGCTTCCGCCGAGCAACGTTCCGAACGCTCCTGCGAACCTGCCCGGCGTCACCTATCAATATGCGCTGCTCAATCTCCCCCAGACGTGGGGCGCGCTTCAGACGTTCCCGGTCGGGACGATCTCCATCAACGGCAGCGACATCGTGGGGACGATCCCCGTAACCCGCTTCAATGGCGGGACCGGGGCTTCGTCCTCCACATTCCTTCGTGGTGACGGGACGTGGGCTACGCCGGCCGGTGGTGGTGGCAGCCTGACGGTCGGCACCAGCACGATTTCGGGCGGCACCAGCGGTCGTGTCTTATACGACAATGCCGGCGTGCTTGGAGAGTATACCGTCAGCGGGACCGGAAGCGTAGCGCTAACGGTCAGCCCGACGTTCACAACTCCGAATCTCGGGACGCCTTCGGCCGCTGTTCTGACCAACGCAACCGGCCTGCCGCTTTCTACTGGCGTAACCGGCAACCTGTCGGTCAACAATCTCAACAGCGGGTCGAGTGCGAGCTCGTCGACCTTCTGGCGCGGTGATGGAACGTGGGCAACGCCGGCCGGGAGCGGCGTTACGGCGTCCGGCACGAATATATTTGGCGGCTCTGGGGCTGGAACAAGCCTCACGTCCAGCCCGCAAAACGTTCTCCTCGGATCGAATGCCGGCCATGCGATAACAAGCGGGAGCGGCGAGAATATTGCGATTGGTGACAGCGCAGGGCAGGCCATCACGACGGGCACTCAGAATACCATCGTCGGCGGCTTGGCTGGCGCAGCGGTCACCAGTGACACCGGGCATACTTTAGTCGGCTATCAAGCCGGCCTGGTGATGAACGGAACGGGCTCGCAGTGGAATACGTTTATCGGTCATGCCTCCGGCATTCGGGCAACGACTGCACAGAGCTGCATTGCTGTCGGCCGCGCGGCGGGGCAAGGCATCGTCAGCGACAACTACTGCACGGTTATGGGCCACGCCGCGATGTTCCTCAACAATGGGGGTGCCTGCAACGGCATTATTGCGATTGGTGACAGCGCAGCCGGGGCCGACGTCACGTCCGGCTCTTCGAATTGGGCCGGATCTGGCCTGACCTACTTCGGCGCGATCAATGACACAAACTGTAACTATATTGGACGGTATACCGGCAAGTCGACCGTGGCCGGCCGCACGAATTCCCATGCCATCGGAGCTCTCGCACGCATTCCGGTGCGGGATAACGCAATCGTTCTCGGGCATGCGATTGTTGCGGTGCAAACGGCCGGGCGATATTGGGATGGCTTTCAGCGAACAGACATCACGGCGAACGCTGGCCTGACCTTCACAATTGCAAACATGAATGCCGGACTGATCATCCGCAGCGGAACGCTAAGCGGCGGTGTCAATGACACGACCGACACGGCGGCAAATATCGTTGCAAGCGGTCCTGGCCAGAATTGCGAAGTGCCGTGCAGTCTCGAGTTCAGCTACGGCAACAACACCACGCAGACTGTTACCGTGGTTGGCGGGACCGGCGTGGCGGTGAGCAGCCTGGGGCTCGGCGGGGCCGTTGCGGCGGGCGCGCTTGCGAAGTTCAGGATCATTATCGGCAACTCAACGTCCGGAACGGAATCCGTTTCGTTGTTCCGGGTCGGGTGA

Tertiary structure

PDB ID
5e0e4a4fdc2cb39ba5d428cd79c79e4231fcb57a285d832dc905a3d5c152bab3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7063
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Spontaneously produced lysogenic phages are an important component of the soybean Bradyrhizobium mobilome Joglekar,P., Ferrell,B.D., Jarvis,T., Haramoto,K., Place,N., Dums,J.T., Polson,S.W., Wommack,K.E. and Fuhrmann,J.J. — — GenBank