Protein

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Genbank accession
VFR12611.1 [GenBank]
Protein name
phage major capsid protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MITGLIWIKGITKFVEEKLAFGATSKELAVQPRNAHICHCPNWGNHFWSPIMVTNINIQRNRRLQWVLKVPTADDGSYCVLVITTNDDRWRVKNEADGSWTAMLLLVQGDQRLLGDRYEYELTADPNALPKVVIATDEPTAIGDQVTRAIQDSRFMPALRLIQSLDTKDALINARQGLVQRLGRHWVAPWYSESDYEVDKVAVKNAAASMITPWDKPAIRGSAVNIRNEMLAITQTLSYTDMTKSPVGVEYDDTERLDDLVLLLDPIWEQENYKLQYGSPMELLGWRFDGTRTNENRRTQGGTAVDIESGTGKVIIDNLKLSGRVDVTAPSLEIEGLYDATDYTIRYSMNISMSLFTNGQFAKSLDWKGAEIPALAALAQNPEGDGRELVLQFRRTVFSLKDGALIKLNVRDMQFATFQRPPGAALGSLLLSVRKPTEEANQLSAHPGIVQEGYDETDEIARVPAYPTNYLSFSERRLNLFENAKFFVSEDIIENENVQLGNHKVLQDDAIRIVPYVMETGALLTKDVVEDNRQPLHNALSNDVGITVRTKVTTVTRGILNALETQSKFAETLFPTITVDTYYTNKDLDKNLGLTWTLNVRISGAASLAADYGKTPLVATDMTRVAAESAKPEYASYMPIAHAAQVASAMILAAAGHEDDFNLRDTAQQHYEAVNPGKTMSDVWQTVAVGESVRKNAAGFTQLVQQGNALVAAAKAGSSAKCHLSK
Physico‐chemical
properties
protein length:726 AA
molecular weight: 80447,14440 Da
isoelectric point:5,34061
aromaticity:0,07576
hydropathy:-0,26543

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SPFM10
[NCBI] 		2528680 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
VFR12611.1 [NCBI]
Genbank nucleotide accession
LR535908 [NCBI]
CDS location
range 171218 -> 173398
strand +
CDS
GTGATCACTGGTCTGATCTGGATTAAAGGTATCACCAAGTTCGTGGAAGAGAAACTGGCGTTCGGCGCTACCAGCAAAGAGCTGGCAGTACAGCCTCGTAACGCGCACATCTGCCACTGCCCGAACTGGGGTAACCACTTCTGGTCTCCGATCATGGTAACCAACATCAACATCCAGCGTAATCGCCGCCTGCAGTGGGTTCTGAAAGTTCCAACCGCTGATGATGGTTCTTACTGTGTTCTAGTTATCACCACCAACGATGACCGCTGGCGTGTGAAGAACGAAGCTGACGGCAGCTGGACTGCAATGCTGCTGCTGGTTCAGGGTGACCAGCGTCTGCTGGGCGATCGCTACGAGTACGAGCTGACCGCGGACCCGAACGCACTGCCGAAAGTTGTTATCGCAACTGACGAACCGACTGCTATCGGTGACCAGGTAACTCGTGCCATTCAGGACTCTCGCTTCATGCCGGCTCTGCGCCTGATCCAGTCTCTGGATACCAAAGATGCGCTCATCAACGCCCGTCAGGGTCTGGTACAGCGCCTGGGCCGTCACTGGGTTGCTCCGTGGTACAGCGAAAGCGACTACGAAGTGGACAAAGTAGCGGTTAAGAACGCAGCTGCGTCCATGATCACTCCGTGGGACAAACCTGCTATCCGCGGTTCTGCGGTTAACATCCGTAACGAAATGCTGGCTATCACTCAGACTCTGTCTTACACCGACATGACCAAATCTCCGGTTGGCGTTGAATACGACGACACCGAACGTCTGGACGACCTCGTCCTTCTGCTCGACCCGATTTGGGAACAAGAGAACTACAAACTGCAGTACGGTTCTCCGATGGAGCTGCTGGGCTGGCGCTTCGACGGTACTCGTACCAACGAGAACCGGAGAACCCAGGGTGGTACTGCTGTTGATATCGAAAGCGGCACCGGCAAAGTCATCATCGACAACCTGAAACTCTCTGGTCGTGTTGACGTGACTGCACCGTCTCTGGAAATCGAAGGTCTGTACGACGCAACCGATTACACCATTCGTTATTCCATGAACATCAGCATGTCTCTGTTCACCAACGGTCAGTTCGCCAAGTCTCTGGACTGGAAAGGTGCTGAAATCCCGGCACTGGCCGCTCTGGCACAGAATCCTGAAGGTGATGGCCGTGAGCTGGTCCTGCAGTTCCGTCGCACTGTGTTCTCCCTGAAAGATGGCGCGCTGATCAAACTGAACGTACGCGACATGCAGTTCGCTACCTTCCAGCGTCCACCGGGTGCGGCGCTGGGTAGCCTGCTGCTGTCTGTGCGTAAGCCGACTGAAGAAGCGAACCAGCTGTCTGCCCATCCGGGTATCGTGCAGGAAGGTTACGATGAAACCGACGAAATCGCTCGTGTGCCGGCGTATCCGACCAACTACCTGAGCTTCTCTGAACGTCGTCTGAACCTGTTTGAGAACGCGAAGTTCTTCGTATCCGAAGACATCATCGAAAACGAAAACGTTCAGCTGGGTAACCACAAAGTCCTGCAGGACGATGCTATCCGTATCGTACCTTACGTGATGGAAACCGGCGCCCTGCTGACCAAAGACGTGGTTGAAGACAACCGTCAGCCGCTGCATAACGCGCTGTCCAACGACGTCGGCATCACCGTTCGTACCAAAGTTACTACTGTAACTCGCGGTATCCTGAATGCTCTGGAAACTCAATCCAAGTTTGCAGAAACCCTGTTCCCGACCATCACTGTGGACACATACTACACCAACAAAGACCTGGACAAAAACCTGGGTCTGACCTGGACGCTGAACGTGCGTATTTCTGGTGCAGCATCTCTGGCTGCTGACTACGGTAAAACTCCGCTGGTCGCAACCGACATGACCCGTGTTGCTGCTGAGAGCGCGAAGCCGGAATATGCCAGCTACATGCCGATCGCCCACGCTGCTCAGGTTGCTTCTGCGATGATTCTGGCTGCTGCCGGTCACGAAGATGACTTCAACCTGCGTGACACTGCTCAGCAGCACTACGAAGCTGTAAACCCTGGCAAAACCATGAGTGACGTATGGCAAACCGTAGCCGTTGGCGAATCTGTACGTAAAAATGCTGCCGGCTTCACCCAGCTGGTTCAGCAGGGCAATGCTCTGGTCGCTGCTGCCAAGGCAGGCTCTTCCGCTAAATGTCATTTATCTAAATAA

Tertiary structure

PDB ID
de7b3ef9ce9a1196391049e544dfd47710affd51a31fa76feab2710fa95f958e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2649
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50