Protein

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Genbank accession
YP_009790287.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence Phold
Probability 1,00
Protein sequence
MATRPLYSSLWAQNAAPEDFGDADVYVPSNPVYPEQTENQYTVGWYVSPNNDLVKQPHQWVNSWAYTVDLAILELITNGSVYQPTISFRKSGIVHVEGQWWLSKADENTASPAPAAWDKAAFNDIVDLNNYAAVKDSEIEAHKGRQDNPHGVTPAQIQGYSKAQIDANVAVVQDDLTSYKQRRDNPHEVTAAQLNALSVAGGRFNGPVVMPAMRLPIGVEVSLSEGIFGGRSQGVSLGINPTIGIPTSNKVELVSDKTFHAIRQRYASQFNAPPPELQLPLLRDLTTYQSGYGGVELTGTIDFHQHGLLMNPDLILTATPAGVRTVVALGSDGVTYAVQTPTASTNLLQRLRDRDMRVSNLRAWSTPLTEDQCYGLGVSVWL
Physico‐chemical
properties
protein length:382 AA
molecular weight: 41757,21300 Da
isoelectric point:5,16595
aromaticity:0,08377
hydropathy:-0,28796

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Shewanella phage SppYZU05
[NCBI] 		1970795 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009790287.1 [NCBI]
Genbank nucleotide accession
NC_047824.1 [NCBI]
CDS location
range 919 -> 2067
strand -
CDS
ATGGCAACAAGACCGTTATATAGCTCTTTGTGGGCACAGAACGCGGCTCCAGAAGACTTCGGGGATGCGGACGTCTACGTACCTTCTAATCCGGTGTATCCTGAACAGACAGAGAACCAATACACTGTCGGCTGGTACGTTTCCCCGAACAATGACCTCGTGAAGCAACCACACCAGTGGGTGAACTCATGGGCGTATACGGTAGACCTCGCCATCCTCGAGTTAATCACAAACGGGAGCGTATACCAACCAACCATCTCCTTCAGAAAAAGTGGAATCGTCCACGTAGAGGGGCAATGGTGGTTATCAAAGGCAGACGAAAACACGGCGTCTCCCGCTCCCGCGGCGTGGGACAAGGCGGCGTTCAACGATATTGTCGACTTGAACAACTACGCTGCGGTGAAGGACTCGGAAATAGAAGCCCACAAAGGGCGTCAAGACAACCCACACGGCGTGACGCCAGCGCAAATCCAAGGGTACAGCAAGGCGCAGATTGACGCGAATGTAGCGGTCGTGCAAGATGACTTGACGTCCTACAAGCAACGCCGCGATAACCCGCATGAGGTGACTGCTGCGCAGCTAAATGCCCTATCTGTCGCAGGGGGGCGGTTTAATGGGCCAGTCGTGATGCCAGCGATGCGGTTACCTATCGGCGTCGAAGTATCTCTCTCGGAAGGAATTTTCGGAGGGCGGAGCCAAGGTGTGTCTCTAGGAATAAACCCGACAATAGGGATCCCAACCTCCAACAAGGTGGAGCTAGTGTCGGATAAAACATTCCACGCGATCCGCCAGCGCTACGCTTCTCAGTTCAACGCGCCGCCTCCTGAACTGCAACTTCCGCTACTCCGCGACTTAACTACGTACCAGTCAGGGTACGGAGGTGTGGAGTTAACGGGGACAATCGACTTCCATCAGCACGGGCTACTTATGAATCCTGACCTCATACTGACGGCTACCCCAGCAGGGGTACGAACGGTCGTCGCACTTGGGAGCGATGGAGTAACTTACGCTGTACAAACACCAACGGCAAGTACGAACCTGCTTCAAAGGTTACGAGACCGCGACATGCGAGTTTCTAACCTGCGCGCATGGTCGACCCCGTTAACAGAAGACCAATGCTATGGACTAGGAGTAAGTGTATGGCTATAG

Tertiary structure

PDB ID
64342d8ecb437364cc3c83e19225b8069d7486db235b00a0a61cf8240c37701b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5578
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of lytic bacteriophages infecting Shewanella putrefaciens and Shewanella baltica for biocontrol of fish and shrimp spoilage during chilled storage Yang,Z., Tao,X., Gao,L. and Rao,S. 2019-03 — GenBank