Protein

View in Explore
Genbank accession
ATS93396.1 [GenBank]
Protein name
bacteriolytic protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MDLNTRFSLYTAQEAADGVAASITQNSLGQWGGQNRRAVNFADPVDPQDLVNKRYFEDVYTPQLDVKVTEATNQANNAASSAATAQGYALAADNSADLAAALLATFKGQYLGALVSNPTLDGNGQPVTAGDLYFSTTENLMKVYTGSAWINAGSTVQSTIKRPVTPIVATAGQTVFPVSGGYDAPYILVFVNGVEVASPDVDVTNGSTIVFSSGLTAGDKVDYAAFGSFQVANPVIDGTSAADFIKTRNARLVTSIADLKALNKNTYNFVLVTGFYASGDGGGGFFLQVPTMPTNGIVQVGNDGGIWRLVVDRDYVSAKQLGARLDGSTDDSSLLNNAKSTLDALGKRLYIPSGVCRISTAITPPKAGVFGDSPQASIIQCNTCSAFLFPANFGLSRPACVIEKLGIQSYGNTCDGLYAFRAPGVASGASPVYNSGLTVRDVEIGTGGRFGGGFSLKDFFRVNVENIGMTDVSSAVLLTGSVVQAVFRNVTANGDNAPTVLNRYGFQTAAASYSSGTLGPEHISTWDCSFIRYTRGVQHDAGLMVSFNNTDLETFTHGFYLSQPCTVRGGISAPAPAASGTAAWIGLFKAISDFDVANGTLIDDLEINTLNTPGTPASSYGILIGNNVNKCVGTTIRSPRIRGNTSSMVGGIVANLAGGDIVIEDAIINGSVVTGTTVSVSNASYARVVGNRSNTGGTVNGSLSITDNGVGSIGDVRGNEFATITNTLNAYSGTWTPGTIPNGTPAATTVAVPGAVVGDKVVVGLSSLTGSANCIISGYVSSTGNVAVLLYNVSGASQTIPSGTLQVTVLKS
Physico‐chemical
properties
protein length:812 AA
molecular weight: 83713,47300 Da
isoelectric point:4,94558
aromaticity:0,08005
hydropathy:0,10259

Domains

Domains [InterPro]
IPR012334
314–404
IPR012334
ATS93396.1
1 812
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage DU_RP_I
[NCBI] 		2041493 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATS93396.1 [NCBI]
Genbank nucleotide accession
MF979559 [NCBI]
CDS location
range 33914 -> 36352
strand +
CDS
ATGGACCTCAACACTCGGTTCTCTCTGTACACTGCTCAGGAGGCCGCTGATGGTGTTGCAGCATCCATCACTCAGAACTCCCTGGGGCAGTGGGGCGGCCAGAACCGCAGGGCCGTCAACTTCGCAGACCCGGTTGATCCACAAGACCTGGTGAACAAGCGATACTTCGAGGACGTGTACACACCTCAGTTGGACGTGAAGGTCACCGAAGCCACCAACCAGGCCAACAACGCGGCCTCCAGCGCCGCCACTGCGCAGGGCTATGCTCTCGCTGCGGACAACTCCGCGGACCTCGCTGCGGCCCTCCTGGCGACCTTCAAAGGCCAGTATCTCGGTGCCCTTGTATCTAACCCCACGCTGGACGGTAACGGCCAGCCGGTGACTGCTGGTGACCTCTACTTCAGCACCACCGAGAACCTGATGAAGGTGTACACCGGGTCCGCGTGGATCAACGCTGGGTCAACCGTCCAGTCCACCATCAAACGTCCTGTCACACCCATCGTGGCAACCGCAGGCCAGACCGTGTTCCCGGTGTCTGGTGGGTACGACGCCCCATACATTCTCGTGTTTGTGAATGGGGTTGAGGTGGCTTCTCCAGATGTGGACGTGACTAACGGCAGCACCATCGTATTCTCCAGCGGCCTGACTGCTGGAGATAAAGTGGATTACGCAGCGTTTGGTTCGTTCCAGGTGGCCAACCCGGTTATCGATGGGACCAGTGCCGCAGACTTCATCAAGACACGCAATGCCCGTTTAGTTACCTCTATTGCCGACCTGAAGGCCCTCAATAAGAACACCTACAACTTCGTTCTCGTCACTGGCTTCTATGCTTCAGGGGATGGTGGCGGCGGTTTCTTCCTTCAGGTTCCCACGATGCCCACCAACGGTATCGTTCAGGTCGGGAATGACGGAGGCATCTGGCGGTTGGTGGTTGATCGGGATTATGTTTCCGCGAAACAACTAGGTGCGAGACTGGACGGTTCAACGGATGACTCCTCTCTCCTGAACAACGCCAAGTCCACTCTCGATGCTCTTGGTAAGAGGCTGTATATCCCGTCTGGGGTTTGCAGAATCTCAACAGCAATCACTCCACCAAAGGCTGGTGTGTTTGGGGATAGTCCTCAAGCGTCCATCATCCAGTGCAACACCTGCTCTGCATTCCTATTCCCAGCAAATTTTGGGCTCTCTCGTCCGGCTTGTGTCATTGAGAAGTTGGGGATTCAGTCCTACGGCAACACCTGCGATGGGCTATACGCTTTCCGTGCCCCTGGGGTGGCATCTGGAGCATCGCCCGTCTACAACAGCGGCCTAACTGTTAGGGATGTTGAGATTGGTACGGGCGGACGATTCGGTGGCGGTTTCTCACTGAAGGACTTCTTCCGAGTGAACGTAGAGAACATTGGCATGACTGATGTGAGTTCCGCCGTATTGCTCACCGGGTCAGTTGTGCAGGCAGTATTCCGAAATGTCACCGCAAACGGTGATAACGCACCGACTGTTCTTAACCGGTATGGTTTCCAAACAGCCGCAGCTTCCTATTCCAGCGGTACGCTAGGTCCTGAACACATTAGTACGTGGGATTGCAGCTTCATTCGCTATACACGCGGTGTTCAACACGATGCTGGGCTCATGGTCTCGTTCAACAATACGGACCTGGAAACTTTCACACACGGCTTCTATCTCTCGCAGCCCTGCACTGTGCGTGGTGGTATTAGCGCCCCGGCTCCGGCAGCTTCAGGGACTGCTGCGTGGATTGGGCTTTTCAAAGCTATTTCTGATTTTGACGTAGCCAACGGCACTCTGATCGATGACCTTGAGATCAACACGCTAAACACCCCAGGAACTCCAGCCTCTTCGTATGGGATTCTCATTGGCAACAATGTGAATAAGTGCGTTGGTACTACAATCCGTAGTCCCAGGATTCGAGGTAACACTAGTTCAATGGTCGGTGGGATTGTCGCTAATCTAGCTGGAGGTGACATCGTTATCGAGGATGCCATCATCAACGGCAGTGTGGTTACTGGAACTACGGTGTCTGTGAGCAATGCTTCCTATGCAAGGGTTGTGGGCAATCGAAGTAACACCGGTGGGACTGTAAATGGTTCCCTGTCAATCACAGATAACGGTGTTGGTTCCATTGGTGATGTTCGTGGAAATGAGTTTGCCACCATTACCAACACCCTCAATGCCTATTCCGGTACATGGACGCCTGGAACAATTCCTAACGGAACACCAGCAGCAACAACGGTGGCCGTCCCTGGCGCAGTGGTTGGTGACAAAGTAGTGGTCGGCCTTTCCAGCCTGACCGGATCGGCCAACTGCATCATTTCCGGCTATGTGTCTTCCACCGGAAATGTGGCTGTCCTGTTGTATAACGTCTCTGGTGCATCACAGACGATTCCCTCCGGGACTCTCCAGGTAACAGTCCTCAAGTCGTAA

Tertiary structure

PDB ID
7e73551987e17b13b00b2e6e6802567d825b5de77cefa7d42d16e4a00f239cf9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7986
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage (DU_RP_I) infecting Ralstonia solanacearum Park,T.-H. 2017-09-30 — GenBank