Protein

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Genbank accession
YP_009099699.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAGEITLPNVGLTAFWNLGDNSYKDGMDLNLTLMSVLAQAAILSQEAAVPGVPVAGGVYLATTDWSATVTTNSLQVYLNTTGFAPAAPPPGVTVRNSGEWIEIVPQEGWTLYDRAANKLITFDGAAWVDTVPASTLPDFTGNAGKHLAVNGTEDGTEWVDASGSAISISQDTATNHAVTDADLAGNKLLKMNNAAANTVTVPSGLTGTEPLTIVQTGAGQTTIVAGGGVTVSSLGGLLAISGQYGSATLIPNGADSYLLIGALA
Physico‐chemical
properties
protein length:264 AA
molecular weight: 26748,57110 Da
isoelectric point:4,05003
aromaticity:0,06061
hydropathy:0,20833

Domains

Domains [InterPro]
IPR021251
92–128
IPR021251
YP_009099699.1
1 264
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Ruegeria phage DSS3-P1
[NCBI] 		1555208 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ruegeria pomeroyi DSS-3
[NCBI] 		246200 Bacteria > Proteobacteria > Alphaproteobacteria > Rhodobacterales > Rhodobacteraceae > Ruegeria

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009099699.1 [NCBI]
Genbank nucleotide accession
NC_025428 [NCBI]
CDS location
range 19312 -> 20106
strand -
CDS
ATGGCTGGAGAAATCACCCTCCCGAACGTGGGCCTGACCGCTTTCTGGAACCTGGGGGACAACTCGTACAAAGACGGGATGGACCTGAACCTGACTCTTATGTCCGTCTTGGCGCAGGCGGCGATCCTGTCGCAAGAGGCGGCGGTCCCGGGCGTCCCGGTGGCGGGTGGGGTCTACCTCGCTACGACCGACTGGTCCGCCACGGTGACGACGAACAGCCTCCAGGTCTACCTGAACACGACCGGGTTCGCACCGGCAGCCCCTCCCCCCGGCGTTACAGTTCGGAATAGCGGCGAGTGGATCGAGATCGTGCCGCAGGAGGGCTGGACGCTCTACGACCGCGCCGCGAACAAACTCATCACCTTCGACGGCGCGGCTTGGGTCGATACGGTTCCCGCTTCTACGCTGCCGGATTTCACCGGGAACGCCGGGAAACATCTCGCGGTCAACGGGACCGAGGACGGGACCGAGTGGGTGGATGCGAGCGGTAGCGCGATCAGCATCTCCCAGGACACCGCGACCAACCACGCCGTCACCGACGCTGACCTGGCCGGGAACAAGCTGCTCAAGATGAACAACGCGGCGGCGAACACCGTGACCGTGCCCTCTGGACTCACCGGGACCGAACCGCTGACCATCGTCCAGACCGGGGCCGGGCAAACCACGATCGTCGCGGGCGGCGGCGTGACGGTGAGCAGTCTCGGCGGCCTCCTGGCGATCTCGGGCCAGTATGGCTCGGCTACCCTGATCCCGAACGGCGCGGATTCCTACCTCCTGATCGGGGCGCTCGCATGA

Tertiary structure

PDB ID
fc5bb2b6cc64851a12a057e278f3ad01147045ed65b077dbce01531087e1239d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8806
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage DSS3-P1, which infects Ruegeria pomeroyi, a member of the marine Roseobacter clade Huang,S. and Chen,F. 2018-09-27 — GenBank