Protein

View in Explore
Genbank accession
AEZ65691.1 [GenBank]
Protein name
virion structural protein and packaging
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
TSP
Evidence Phold
Probability 1,00
Protein sequence
MRYIGLDPYRNTVVQIDGNKSQYINVRSFGATGLDRYFTGSVSGVNSSGTSIYFNGISDFYEYENDYFIIGRRITAFFYENTSTPSAALYNFIFTNPDSTPVGAIHDSTGAAGSEVKYFVYPFNPQTGVLSPYGSEITQNNIVSDPDTTFDEQNYIQFTLQRSSNQYLPLIFRRYNGVLKFLGIPGNNAVGTGSTITFQDRGAIQIASWDEDYVAGNSRFFIPDFLSDQISYAANDAGPTIKVVTGKRTLEIKYKNEITGALELVDAFNNQADLSPLFGGSTTVKFKFDDTKAIQDAIDYGKDFIIKDIFFPSGTYNVGHVELYNENGTNNAYDGISLRGVGTSSIIKRGPSFINTQDKYGSIGIMGNPSDRVTGISFSNLAFDGNKTETFATKNPANDIYGISSKYQDMLALEHVDLLTVDNCSFYNGAGTGIYSIDSEKLNLTNCKIFQMSKPYEPNIPPLKIRETDKVIAQGNLFENCTGVADFTGIDVSVINNNIVNNCGDTGLLLRASDNWNATGNLTFNSSGSVIQSVDLYQNDYSRASIAIKKGTPMAPYYFTVTEGQLPVDIAVGTLEAKVYALNANYTISNVNSPTTYLKVIESVDQLRAGIFGVTAPIANIAAGDNTINGDANAGHAILGTSNYNLIDVDGSNPHYGYSYRITGKVRLGDFPIKQIKAISSTQIKLFFETTSDFLKFLFFVGGAGGSNDKIISFGIADSNNDLASWNDQNVEYSILGTTAADSTLTLAIPSDVSDAFPNGNETLVTRGASVKIVRDNYFIADGNVYVSD
Physico‐chemical
properties
protein length:789 AA
molecular weight: 85882,25860 Da
isoelectric point:4,65400
aromaticity:0,11787
hydropathy:-0,19404

Domains

Domains [InterPro]
IPR012334
280–653
IPR012334
IPR011050
288–653
IPR011050
AEZ65691.1
1 789
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-TIM5
[NCBI] 		1137745 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 8102
[NCBI] 		84588 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AEZ65691.1 [NCBI]
Genbank nucleotide accession
JQ245707 [NCBI]
CDS location
range 83346 -> 85715
strand +
CDS
ATGAGGTATATTGGTCTAGACCCTTATAGAAATACAGTAGTCCAAATTGATGGGAACAAAAGTCAGTACATTAACGTAAGATCTTTTGGAGCAACAGGACTCGATCGCTATTTTACCGGCTCGGTCTCCGGTGTTAATTCTTCAGGAACCTCTATTTACTTTAATGGAATTTCTGATTTTTACGAGTATGAAAACGACTATTTTATAATCGGTAGAAGGATTACTGCATTTTTCTACGAAAATACTTCTACGCCATCGGCGGCGTTGTATAATTTTATCTTCACAAACCCAGACTCAACTCCAGTAGGTGCAATCCACGATAGCACAGGAGCGGCGGGCTCAGAAGTTAAATATTTTGTATATCCTTTCAACCCACAAACAGGAGTTCTATCTCCCTATGGATCAGAGATTACTCAAAATAATATTGTATCTGACCCAGACACTACTTTTGACGAGCAAAATTATATTCAGTTTACCCTTCAAAGATCTAGCAACCAGTACCTACCTTTAATTTTTAGAAGATACAATGGCGTACTTAAATTCCTTGGAATACCAGGAAATAACGCGGTAGGAACAGGGTCTACAATTACCTTCCAAGATAGAGGGGCTATTCAAATTGCTTCTTGGGACGAAGACTATGTTGCAGGTAATTCTAGATTCTTTATTCCAGATTTCTTAAGCGATCAAATTTCTTATGCTGCTAACGATGCTGGACCTACTATTAAAGTAGTAACAGGAAAAAGAACTTTAGAGATCAAATATAAAAACGAGATTACAGGAGCTCTTGAACTCGTAGATGCATTTAACAACCAGGCAGATCTTTCTCCGCTGTTTGGAGGGAGCACTACAGTTAAATTCAAGTTTGACGATACAAAGGCCATCCAAGATGCAATTGATTACGGAAAAGACTTTATTATCAAAGATATTTTCTTCCCATCTGGAACTTATAACGTTGGCCACGTCGAATTATATAACGAAAACGGAACAAACAACGCGTACGATGGCATTTCTTTAAGAGGAGTTGGTACATCTTCGATTATTAAAAGAGGACCTTCGTTTATTAACACTCAAGACAAGTATGGCTCGATAGGTATTATGGGTAACCCTAGCGATAGAGTTACCGGTATTAGCTTTAGTAATCTTGCTTTTGATGGTAATAAAACAGAAACATTTGCCACAAAGAACCCAGCAAACGACATCTATGGAATTTCTAGTAAGTACCAAGACATGCTTGCTTTAGAACACGTAGATTTGCTTACTGTAGATAATTGCTCGTTCTATAATGGAGCCGGCACCGGAATTTATTCTATAGACTCTGAAAAACTAAATCTTACAAACTGTAAGATATTCCAGATGTCTAAGCCTTACGAACCTAACATTCCTCCTCTTAAGATTAGAGAAACTGACAAAGTTATTGCGCAAGGCAACCTATTTGAAAACTGCACCGGTGTTGCAGACTTTACTGGTATTGATGTCTCGGTAATTAACAACAATATCGTTAATAATTGTGGCGATACTGGATTACTACTAAGAGCTTCTGATAACTGGAATGCCACTGGCAACCTAACCTTTAACTCCTCTGGAAGCGTTATTCAGTCTGTTGATCTATATCAAAACGATTACAGCAGAGCTTCTATTGCCATTAAGAAGGGTACTCCTATGGCACCTTACTACTTCACAGTAACCGAAGGCCAGCTTCCTGTAGATATTGCTGTTGGAACTTTGGAAGCAAAAGTATATGCATTAAATGCAAATTATACTATATCCAATGTAAACTCCCCGACAACGTATCTTAAAGTTATTGAAAGTGTTGATCAGCTAAGAGCCGGTATTTTTGGTGTAACTGCACCTATAGCCAATATTGCTGCAGGAGACAACACTATTAACGGAGACGCAAACGCAGGCCACGCAATTTTAGGCACAAGCAATTACAATTTAATTGATGTTGATGGCTCTAATCCTCACTATGGCTACTCTTACAGAATTACTGGTAAAGTAAGATTAGGAGACTTCCCTATCAAGCAAATCAAGGCAATCTCTTCTACACAAATTAAGCTTTTCTTTGAAACTACTTCTGATTTCCTCAAATTCTTATTCTTTGTAGGAGGAGCCGGTGGTTCTAATGATAAGATTATTAGTTTTGGAATAGCAGATAGTAATAACGATCTTGCTAGCTGGAACGATCAAAACGTTGAATATTCCATACTAGGGACTACTGCAGCTGATTCTACTCTTACCCTTGCAATTCCTTCTGATGTAAGTGACGCGTTCCCCAATGGAAACGAAACCCTTGTAACCAGAGGGGCCTCGGTTAAAATTGTAAGAGATAATTACTTCATTGCTGACGGAAATGTCTACGTATCTGATTGA

Tertiary structure

PDB ID
ab3368eeea6c8aba3106de5349512cdce34fe3d12bc0756694cb0e58731caeb4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4681
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50