Protein

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Genbank accession
YP_009792878.1 [GenBank]
Protein name
major tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,56
Protein sequence
MLLPNGAQIFVETSRGEDSEATAITNAGNLVATVASKGDLVKGVYVIVTQSTWAKMVSRGLIVTAAPETSITLAGIDTSDTLVFPAGGTMSFAKITGWTEIPCVQEIGQDRGEQQNYTYQCLSDDKEKQIPTFKSGISLTYTFAHEFDNPIYPILRKQDSSGQVTAVRMYVPKANKMRMWAGIWSFNDIPSTQVNEMETVQLAVSQKGDFTFVSSALARPGA
Physico‐chemical
properties
protein length:222 AA
molecular weight: 24090,03890 Da
isoelectric point:5,06915
aromaticity:0,08559
hydropathy:-0,10766

Domains

Domains [InterPro]
IPR014918
51–214
IPR014918
YP_009792878.1
1 222
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage vB_SflS-ISF001
[NCBI] 		2048005 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009792878.1 [NCBI]
Genbank nucleotide accession
NC_047863 [NCBI]
CDS location
range 25136 -> 25804
strand -
CDS
ATGCTCTTACCAAATGGCGCGCAAATTTTCGTGGAAACCTCTCGCGGAGAAGATAGTGAGGCAACCGCTATTACTAACGCAGGAAATCTTGTTGCTACAGTTGCATCTAAGGGCGACTTAGTAAAAGGCGTTTACGTTATTGTAACTCAGTCAACCTGGGCCAAGATGGTCAGTCGAGGGCTGATTGTTACTGCCGCTCCGGAAACAAGCATCACTCTCGCTGGGATTGACACCTCTGATACTCTTGTTTTCCCGGCTGGCGGCACGATGAGCTTTGCAAAGATTACTGGCTGGACTGAGATTCCTTGCGTACAGGAGATTGGTCAGGACCGCGGCGAGCAGCAGAATTATACTTATCAGTGCTTGTCCGATGATAAAGAAAAGCAGATCCCAACGTTTAAATCTGGGATCTCGCTAACTTACACATTCGCGCACGAATTTGATAACCCGATCTACCCTATTCTGCGTAAGCAGGATTCTTCTGGTCAGGTAACTGCGGTTCGGATGTATGTTCCAAAAGCGAACAAGATGCGCATGTGGGCTGGTATCTGGTCTTTTAACGACATTCCATCTACGCAAGTAAACGAAATGGAAACGGTACAACTCGCCGTATCCCAGAAGGGTGATTTCACTTTCGTTTCATCCGCTCTGGCACGACCTGGTGCCTAA

Tertiary structure

PDB ID
f1ee17a629665ea9edea5b4b5455ead37a6f714d940d075a4a4ba57c776a0696
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9224
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative genomic analysis of a novel S. flexneri bacteriophage vB_SflS-ISF001 Shahin,K., Bouzari,M. and Wang,R. 2019-04-05 — GenBank