Protein

View in Explore
Genbank accession
AGN12247.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAVNFPNSPSTNDTHTENGYTWKWDGTTWIIQSLAPPGPTGPSGPSGPSGPSGPSGPPGPPGPTGGSGSSTFVGLTDTPSTFTADKFVKVNSSGNALEWTDAPTNGLPIVNVADFGALPGASGATNRTSIEAAINSLASTGGLVYIPTGTYDITGTILIDQGVMGDGGGVSIIGPTQNYRITAADTEGVCLRSTDAGSDIIKVNNVRNVTFANLAFDHKEGTSRTGGNAVHFYSNVNTQQIRMDRIYIRRQFGAIKVDGHSIATFRDIEIRDIVNEGGSFGMLFSASAGGSERQDQIRCENVIIDGVISGSPHTSAVGLWVKDFVNSIWFLNCAVLRCNKGFLMDSTVPSGSTGNPGSFFRINDCDFDTNNSYGIEIAGGSFIWINNPYISSNFVNGLRVSSTFTGVLRVNAADCRGNRQHGIYIDSQDHKKIFIRDSQCSNNSATNTNQYDGLAFYDSNGTNQSDIHIDGGQYGGDIMGSTDGGNSTSTPQRYGIAAVNNSKYDRVTINNVDCTGNRTGTVQFNPNNGSDNYIHNVIGFHGTHSGAH
Physico‐chemical
properties
protein length:548 AA
molecular weight: 57859,70820 Da
isoelectric point:5,31202
aromaticity:0,08577
hydropathy:-0,34836

Domains

Domains [InterPro]
IPR011050
107–482
IPR011050
IPR012334
110–547
IPR012334
AGN12247.1
1 548
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSM5
[NCBI] 		536454 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGN12247.1 [NCBI]
Genbank nucleotide accession
HQ632825 [NCBI]
CDS location
range 62745 -> 64391
strand -
CDS
ATGGCAGTAAATTTTCCAAATAGTCCTTCAACTAACGATACCCACACCGAGAACGGTTATACATGGAAGTGGGATGGAACTACTTGGATAATTCAATCTCTTGCTCCTCCAGGTCCTACAGGTCCAAGTGGTCCATCAGGTCCAAGTGGTCCAAGTGGTCCTAGCGGTCCTCCAGGTCCTCCAGGTCCAACAGGAGGTTCTGGGTCTTCTACTTTTGTAGGTTTAACAGATACACCATCTACCTTTACTGCTGATAAGTTTGTAAAAGTAAATTCTAGTGGTAATGCTTTAGAATGGACTGATGCTCCTACTAATGGATTACCTATAGTTAATGTTGCAGATTTTGGAGCACTTCCAGGTGCTAGTGGAGCAACAAATAGAACTAGTATTGAAGCAGCAATTAACTCATTAGCATCTACGGGAGGATTGGTTTATATTCCTACAGGAACTTATGATATAACAGGAACTATATTAATAGATCAAGGTGTTATGGGTGATGGTGGTGGTGTAAGTATCATCGGTCCAACTCAGAATTATAGAATTACTGCTGCTGATACTGAAGGAGTTTGTTTGAGATCTACTGATGCTGGTAGTGATATAATAAAAGTAAATAATGTAAGAAATGTAACTTTTGCCAATCTAGCATTTGATCATAAAGAAGGCACATCTAGAACTGGTGGAAATGCTGTTCATTTTTATTCTAATGTGAATACTCAACAGATTAGAATGGATAGGATTTATATCCGAAGACAATTTGGTGCTATTAAAGTAGATGGGCATTCAATCGCAACATTTAGAGATATAGAGATTAGAGATATTGTAAATGAAGGTGGTTCCTTTGGAATGTTATTCTCTGCTTCTGCTGGTGGATCAGAAAGACAAGATCAGATAAGATGTGAGAATGTTATTATTGATGGTGTGATTAGTGGAAGTCCACATACATCGGCAGTAGGATTATGGGTTAAAGATTTTGTAAATTCAATATGGTTCCTTAATTGTGCTGTTCTTAGATGTAATAAAGGATTCTTAATGGATTCAACTGTTCCTAGTGGATCAACAGGTAATCCTGGTTCATTCTTTAGAATAAATGATTGTGATTTTGATACAAATAATTCATATGGTATTGAGATTGCTGGTGGTAGTTTCATTTGGATTAATAACCCATATATAAGTAGCAATTTCGTTAATGGTTTGAGGGTTAGTAGTACTTTTACGGGTGTATTAAGAGTAAATGCTGCTGACTGTAGAGGTAATAGACAGCACGGAATTTATATTGATTCACAAGATCATAAGAAGATCTTTATAAGAGATTCGCAGTGCTCTAATAATTCTGCAACTAATACTAATCAATATGATGGTCTTGCTTTTTATGATTCTAATGGAACTAATCAATCAGATATTCATATTGATGGTGGACAGTATGGTGGAGATATAATGGGATCAACTGATGGTGGTAATAGTACTAGCACACCTCAAAGATATGGTATAGCAGCAGTTAATAACTCAAAATATGATAGAGTTACTATTAATAATGTAGATTGTACTGGAAATAGAACTGGTACAGTTCAATTTAACCCTAATAATGGATCTGATAATTACATTCATAATGTTATCGGATTCCACGGAACACATTCAGGTGCTCACTAA

Tertiary structure

PDB ID
bfa3bbbfadd1a244bca080d8f3cc98e965bbaa162b2e9c32b1a397bf5bc27b56
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8241
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Prochlorococcus phage P-SSM5 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank