Protein

View in Explore
Genbank accession
WCA46459.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,71
TF
Evidence Phold
Probability 1,00
Protein sequence
MSSILPGADLNLAGSPTPSDAQRIASYTDVGKYVIGREYLGKWYNLWRASPGATPQIVVRGDSTIEGGTNISNALYKPTAMLTTFARAKGFVMTAVNGGVSGTTTNDWLNTHLPADLVTYAGSPPPLYIIHYGMNDPRSNAANMTPAQTIAALKAGLALLRATWSAQQTSVLVVLPNTAAWDAVGVNEAWREAINYQYTQACRDYGVTCFDTYAWAREARYGLLSGWLDSPAVHPNEDFNALIWGAIADVMFPTGLQMMNGATTLISDLSAGYTNPGIASGGACVTKRGDMVMATGYIAKTTPATIAANTLLMNIPAGFEPVDSRVYGVQLAAFDGSTWQYVHAELRQASNSNNLLLREAISLTATQIHFGPGVWRH
Physico‐chemical
properties
protein length:377 AA
molecular weight: 40352,17750 Da
isoelectric point:6,05968
aromaticity:0,09549
hydropathy:-0,01141

Domains

Domains [InterPro]
IPR036514
40–253
IPR036514
SSF52266
43–250
SSF52266
cd00229
57–250
cd00229
IPR013830
61–238
IPR013830
WCA46459.1
1 377
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Caulobacter phage RapA
[NCBI] 		3020394 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCA46459.1 [NCBI]
Genbank nucleotide accession
OQ137562 [NCBI]
CDS location
range 38902 -> 40035
strand -
CDS
ATGAGCAGCATCCTTCCGGGCGCGGACCTGAACTTGGCGGGCTCTCCGACGCCGTCAGACGCCCAGCGCATCGCGTCGTATACCGACGTCGGCAAGTACGTGATCGGCCGAGAATATCTCGGCAAGTGGTACAATCTTTGGCGTGCGTCACCCGGTGCAACGCCGCAGATCGTCGTCCGTGGTGACAGTACGATCGAAGGTGGCACGAACATTAGTAACGCGCTGTATAAGCCAACAGCCATGCTTACGACCTTCGCACGGGCGAAAGGTTTTGTGATGACGGCGGTCAATGGCGGCGTGAGTGGCACGACTACCAACGATTGGTTGAACACCCATCTTCCGGCCGATCTGGTGACCTACGCTGGATCGCCGCCGCCGCTCTACATCATCCATTACGGGATGAACGACCCGCGCTCGAATGCGGCAAACATGACCCCGGCTCAGACTATAGCAGCGCTTAAAGCGGGCTTAGCGCTTTTGCGCGCCACTTGGTCGGCTCAACAAACTTCAGTGCTTGTAGTCCTTCCGAATACCGCCGCTTGGGATGCGGTTGGCGTAAACGAGGCGTGGCGCGAGGCGATCAACTATCAGTACACTCAGGCTTGCCGCGACTATGGCGTGACCTGTTTCGACACGTACGCTTGGGCACGTGAGGCGCGGTATGGGCTGTTGTCCGGTTGGCTTGATAGCCCTGCCGTCCATCCGAATGAAGATTTCAATGCGCTCATCTGGGGCGCTATTGCCGATGTCATGTTCCCCACCGGCCTGCAAATGATGAACGGCGCAACGACGCTGATTTCTGATCTCTCGGCAGGCTATACGAACCCCGGCATTGCGTCGGGCGGGGCGTGCGTTACCAAGCGCGGCGATATGGTCATGGCCACGGGGTACATCGCCAAGACGACGCCTGCGACGATCGCGGCCAACACTCTGCTGATGAATATCCCCGCCGGTTTTGAGCCAGTGGACAGCCGTGTTTACGGGGTGCAACTCGCCGCCTTCGATGGATCGACTTGGCAGTACGTCCATGCTGAGCTTCGTCAGGCCTCCAACAGCAACAACCTTCTGCTACGTGAGGCCATCAGCCTGACGGCCACTCAGATTCACTTTGGCCCCGGCGTCTGGCGTCACTAG

Tertiary structure

PDB ID
fa2c624b920104dcf645b14366ed6470612a02440532d4ae2d1ad93a4884d91d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8210
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
New Genera and Species of Caulobacter and Brevundimonas Bacteriophages Provide Insights into Phage Genome Evolution Ely,B., Hils,M., Clarke,A., Albert,M., Holness,N., Lenski,J. and Mohammadi,T. 2024 — GenBank