Protein

View in Explore
Genbank accession
QDH45144.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MSDIFAGITDAANDLYQDARDRLMGDGTTTLRFRNCGGIKMDAVTNEEHQSDLDIADNELESGAKASDHAAVQPKVITVTGVVVGYIDESIQESTINDVTGLRTMDFLDDIQLPQVVSTVLEGTRDFAVNKLASFIDWGGLDATISRSLVPWLPDFSIAEQLKSSDNMRIEQVYRTLLDLQKNVTYCDVDTGIFKYTNMLLKSVRVVQAKDGSATFTLTFREVIEVPIVVTNAVAAKSTGRPANNGTKKSGRAQGQGDATSKKDINTTTSINEKRVNDNRGFGVTLGDMFGFNLRGIF
Physico‐chemical
properties
protein length:298 AA
molecular weight: 32522,13150 Da
isoelectric point:4,80042
aromaticity:0,06711
hydropathy:-0,24027

Domains

Domains [InterPro]
IPR048494
41–227
IPR048494
QDH45144.1
1 298
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SE13
[NCBI] 		2575325 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH45144.1 [NCBI]
Genbank nucleotide accession
MK770411 [NCBI]
CDS location
range 28288 -> 29184
strand +
CDS
ATGAGTGACATCTTTGCTGGAATTACTGATGCTGCCAACGACCTGTACCAAGACGCCCGTGACAGACTCATGGGCGACGGTACAACCACCTTACGCTTCCGCAACTGCGGAGGCATTAAGATGGATGCTGTCACTAACGAAGAACATCAGTCTGACCTTGACATTGCTGACAACGAACTTGAATCCGGGGCCAAGGCTTCGGACCATGCTGCTGTACAGCCAAAAGTTATTACGGTCACTGGTGTAGTTGTTGGGTACATCGACGAGTCAATTCAAGAGTCAACGATTAATGACGTAACCGGTTTACGGACTATGGATTTCTTGGATGATATTCAGCTTCCACAGGTAGTGTCTACTGTCCTCGAAGGAACAAGGGACTTTGCTGTAAACAAGCTAGCCTCATTCATAGACTGGGGCGGTTTAGACGCTACCATTTCACGCTCTTTAGTTCCATGGCTTCCTGACTTTAGTATAGCTGAACAGCTTAAGTCTTCGGACAACATGAGGATTGAACAGGTATACCGTACACTGCTGGATTTACAGAAAAACGTTACTTATTGCGACGTTGACACTGGTATATTCAAGTATACTAATATGCTTTTGAAGTCTGTTCGTGTTGTACAGGCGAAAGATGGTTCAGCTACGTTTACCCTTACGTTCCGTGAAGTAATCGAAGTACCGATTGTAGTTACAAACGCTGTAGCCGCTAAGTCGACAGGTCGCCCTGCTAACAACGGTACTAAGAAGAGTGGACGGGCACAAGGTCAGGGTGATGCCACCAGTAAGAAGGACATCAACACAACTACATCGATTAACGAGAAGCGTGTAAACGATAACCGTGGCTTCGGTGTAACGCTTGGCGATATGTTCGGCTTTAACCTACGAGGTATTTTCTAA

Tertiary structure

PDB ID
8d346a069415c771b800fe382db00c83bea03aaccbeddda92ce89e46ad18eadb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6579
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Salmonella bacteriophage diversity and host specificity revealed by physiological characterization and whole genome sequencing Fong,K., Wang,S., Delaquis,P., Tremblay,D., Moineau,S., Levesque,R. and Goodridge,L. 2019-09-14 — GenBank