Protein

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Genbank accession
YP_009910764.1 [GenBank]
Protein name
putative C-type lectin
RBP type
TF
Evidence RBPdetect
Probability 0,67
TF
Evidence Phold
Probability 1,00
Protein sequence
MKDIQQLIKKNSQEGRYEDIFPKTFLDAVIDKESGTTLTDILSSFNMYFLSYTGSRETTRLEVPMSLRKQGLWITYVLYDGNTITEWYGINAVDDASWQDGNNWRLGSNMLVGDISISAGGNWIINGVDTGIPARGEKGDKLLVRVSEDNTKIEYSYNNVLWEELFPLSLITPTFNIAPTVPLEPGINPTVNNIGNPFNVNLQFGLPKSNTINVGSVSTLPAGSTVKVVNSGTQYQVVLDFSIPMGNTGAKGEKGDGWELKGFVDAASNLPSSGNTLGDLYLVGTATPYQAYVWRGSPYNWVNIGTALEIKASIFDGGRADTKYGGARTINCGGADAFLT
Physico‐chemical
properties
protein length:340 AA
molecular weight: 36989,04740 Da
isoelectric point:4,70794
aromaticity:0,10294
hydropathy:-0,21559

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage crAss001
[NCBI] 		2301731 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009910764.1 [NCBI]
Genbank nucleotide accession
NC_049977 [NCBI]
CDS location
range 19048 -> 20070
strand +
CDS
ATGAAAGATATACAACAACTAATTAAGAAGAATAGTCAAGAGGGAAGATATGAAGACATCTTCCCTAAGACTTTTCTTGATGCAGTAATTGACAAGGAGAGTGGGACTACTCTAACAGACATTCTTTCCAGCTTTAATATGTACTTCCTTTCATACACAGGAAGTAGGGAAACTACAAGACTTGAAGTTCCTATGTCACTTAGGAAACAAGGATTGTGGATAACCTATGTACTATATGATGGAAATACTATTACAGAATGGTATGGGATTAATGCTGTGGATGATGCTTCTTGGCAGGATGGTAATAACTGGAGATTAGGTTCAAATATGTTAGTAGGTGATATTAGTATCTCTGCTGGTGGTAATTGGATTATTAATGGAGTTGATACTGGAATTCCTGCAAGAGGAGAGAAAGGAGATAAGTTACTTGTAAGAGTAAGTGAAGATAATACTAAGATAGAGTACTCTTATAACAATGTATTATGGGAGGAACTCTTTCCACTTAGTCTTATTACTCCTACTTTTAATATAGCTCCTACAGTACCTTTAGAACCCGGAATTAACCCAACTGTAAATAATATAGGTAATCCATTTAATGTTAATCTACAGTTTGGTTTACCTAAATCTAATACTATAAATGTAGGTTCTGTATCTACACTTCCTGCTGGTTCTACAGTTAAAGTAGTAAATTCTGGCACTCAATACCAAGTAGTACTTGATTTCTCCATACCTATGGGTAATACTGGTGCTAAAGGTGAAAAAGGAGATGGATGGGAATTAAAAGGCTTTGTAGATGCTGCAAGCAATCTTCCTTCAAGTGGTAATACATTAGGAGATTTATACTTAGTAGGAACAGCAACTCCTTATCAAGCTTATGTGTGGAGAGGTTCTCCTTACAATTGGGTTAATATTGGTACAGCTTTAGAAATCAAGGCATCTATATTTGATGGTGGTAGAGCTGATACTAAGTATGGAGGAGCAAGAACTATTAATTGTGGTGGTGCAGATGCTTTTTTAACATAA

Tertiary structure

PDB ID
06d594159b0557640748cbaa060e42562f1aaf3a8a4c9f4e8640b669ccf6502c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7776
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
PhiCrAss001, a member of the most abundant bacteriophage family in the human gut, infects Bacteroides Shkoporov,A.N., Khokhlova,E.V., Fitzgerald,C.B., Stockdale,S.R., Draper,L.A., Ross,R.P. and Hill,C. 2018-06-26 — GenBank