Protein

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Genbank accession
YP_010756077.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MTITPVTVTPFGGSIGPLNRVTPFTHRDNATFLSILRGIVEYLQGSLQDDINSELERIINEFRDIQEGDQGRYDEFIAEVNTLVAAINNRVGPESMHRVSLTGDYTLTIDPTWPNAHPIRFQFTQDTTGGRIVSFGAGIVGSALVDPTPSAMTELELIPDGAGNWMLRTLNKARVIDVAKDFGARPGGVFDNTVKFNAAMTEARASKCEVFIPAGVWFVSGTVDFSGVVVRGVIAGYDNHNGTIIRGGGSNLLFDQGSTSLDYNRMGLHGIRFENCATGFRISYSVYSHFSDVDVIDTTADAIIVGDVTIIGPIWNMFDRVKGVSTNGYGLRLAGMNWCNSNVFDTCFFDGTTGAINILSASGFGSLDNVFRATEIRSSVGPGIVFNGTNRSTTLEKCFIEPKGPAVVVNNSTVDLILDGNVYGSTRNNVVGYGPYFVEHKAATFNVRVIGGWITTNAVPEQADLRFVGSALPASMTLELLAEPNTVGIQSSGYKIFDETVISAAPRTQRGDFRIRKFSAPQISVAYGDGSKEFVLKRNGTQGGTDFGVEFIDDGNKVWSTGTNGMFKVLGHLASAKVVPATTLGSISGRIPLYNADESIAGSIPVMTGTT
Physico‐chemical
properties
protein length:611 AA
molecular weight: 65591,07290 Da
isoelectric point:5,19568
aromaticity:0,09329
hydropathy:-0,00278

Domains

Domains [InterPro]
IPR011050
172–437
IPR011050
IPR024535
178–230
IPR024535
IPR012334
179–504
IPR012334
YP_010756077.1
1 611
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_N3_8
[NCBI] 		2509748 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010756077.1 [NCBI]
Genbank nucleotide accession
NC_073480.1 [NCBI]
CDS location
range 12335 -> 14170
strand +
CDS
ATGACTATTACACCGGTTACGGTTACCCCTTTTGGAGGTAGCATCGGGCCACTCAACAGAGTAACCCCGTTCACGCATAGGGATAACGCAACGTTCCTGAGTATTTTGCGTGGCATTGTGGAGTACCTTCAAGGTTCGCTCCAAGACGATATCAACAGTGAACTTGAACGCATTATCAATGAGTTCCGCGATATTCAGGAAGGGGACCAGGGGCGCTATGACGAATTCATTGCAGAGGTCAACACCCTTGTAGCGGCAATCAACAACCGTGTTGGCCCAGAGTCCATGCACCGGGTATCCCTGACCGGAGACTACACCCTGACCATTGATCCTACGTGGCCGAATGCCCACCCTATCCGCTTCCAATTCACGCAGGACACAACAGGTGGCAGGATTGTGAGCTTCGGCGCGGGCATTGTCGGCAGCGCACTTGTTGACCCTACCCCGTCCGCCATGACGGAGCTTGAACTGATTCCAGACGGGGCAGGTAATTGGATGCTCCGGACCCTGAACAAAGCACGGGTTATTGACGTGGCAAAGGATTTTGGGGCACGCCCTGGCGGAGTGTTTGACAACACGGTGAAATTCAATGCCGCCATGACTGAAGCCCGCGCCAGCAAGTGCGAGGTCTTTATCCCTGCCGGTGTATGGTTCGTGTCCGGTACCGTGGACTTTTCCGGTGTTGTGGTTCGTGGCGTTATCGCCGGTTATGACAACCACAACGGCACTATCATTCGTGGTGGGGGTTCCAATCTCCTGTTTGACCAGGGTTCCACGAGCCTTGATTACAACCGAATGGGTTTGCACGGTATTCGTTTTGAGAACTGTGCAACAGGGTTCCGTATCAGCTATTCCGTGTACTCGCACTTCAGTGACGTAGACGTCATTGACACAACGGCTGACGCTATCATCGTTGGCGACGTAACCATTATCGGCCCAATTTGGAACATGTTTGACCGTGTGAAAGGTGTTTCCACTAACGGCTACGGGTTACGTCTTGCCGGTATGAATTGGTGCAACTCCAACGTCTTTGACACATGTTTCTTTGACGGCACCACGGGTGCTATCAATATTCTCTCCGCCAGTGGTTTTGGTTCCCTTGACAATGTTTTCCGTGCCACGGAAATACGATCTAGTGTTGGCCCTGGCATTGTGTTCAATGGCACTAACCGCTCTACCACGTTGGAGAAGTGTTTCATTGAGCCGAAAGGTCCGGCTGTTGTGGTCAACAACTCCACTGTTGACCTGATCCTTGACGGCAACGTGTACGGCTCCACCCGTAACAACGTTGTTGGTTACGGTCCGTACTTTGTGGAGCACAAGGCGGCTACGTTCAATGTCCGTGTCATTGGGGGATGGATAACAACGAACGCTGTACCGGAGCAAGCTGATTTGCGTTTCGTTGGTTCAGCGCTTCCCGCGTCCATGACACTTGAACTCCTGGCGGAACCAAACACCGTCGGTATTCAGTCCAGCGGCTACAAAATCTTCGATGAAACCGTCATTAGTGCCGCGCCACGAACGCAGCGCGGAGACTTCAGGATTCGCAAGTTCAGTGCCCCGCAAATCTCCGTGGCCTATGGGGATGGGTCGAAGGAATTTGTGTTGAAGCGGAACGGAACCCAGGGCGGAACTGATTTTGGGGTCGAGTTCATTGATGACGGTAACAAGGTGTGGAGTACCGGAACTAACGGCATGTTCAAGGTGCTCGGTCACTTGGCAAGCGCAAAGGTAGTGCCCGCAACAACACTTGGCTCAATCTCTGGGCGTATCCCGCTCTACAACGCGGACGAATCCATTGCAGGTTCCATCCCCGTCATGACGGGAACAACCTAA

Tertiary structure

PDB ID
4974e184c03cb58043019fcf940646edfe5b682bac654770301b4b20cf94622c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7056
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank