Protein

View in Explore
Genbank accession
YP_009793730.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MATAPKTTVTYNLNGTDRDFQIPFEYLARKFVQVTLVGVDRKVLTLNIDYRFTQRTIITTTKGWGPADGYQLIEIRRYTSATERLVDFSDGSILRAYDLNTAQVQSLHIAEEGRDIATDTIGVNNDGDLDARGRKIVNVADGTSDFDAVNLRQQRLWAGSAMNQADRAKSEADRATTQADRATAQAQASAGSAATSKAQADESLKWAGESYTHRQASAASAAASLKSAQDAAGSNSAAAAQAAEATRQAGLATSNGAAQVSLATTQANRAKDEADRATAQANLATTNGAAQVSLAKAQADRATSEADRAKSEADKLSGMNGLANAIESTAGNTVKFKDGWAISAQGVTTNNFWSRNGASFEFDKGMIVRGNIDVLGNIDANNLTSKVGSLNLKPASAGANTHVWFRMPDGVTENALIYVDSGGTMHFRPRAQADYLTLSADGSVNMRNTLRISGGGAIITGRVTTDEVMSNGTVWAGGGQSWMATDGNIYGPVWGGYLSNRIAAKQNAHHFQAGRVGVGAPGGGYRQFRVNFHAPMGGPTVQITIYRPALHVAVGARGEAWVDGIDENGFTCWVHCEAGAVWDTYIDWMASPAVNAAGG
Physico‐chemical
properties
protein length:599 AA
molecular weight: 63250,10450 Da
isoelectric point:6,33842
aromaticity:0,07179
hydropathy:-0,33990

Domains

Domains [InterPro]
IPR005604
1–131
IPR005604 Coil Coil Coil G3DSA:6.20.70.20
IPR011049
116–153
IPR011049
YP_009793730.1
1 599
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage UNO-SLW1
[NCBI] 		1873993 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009793730.1 [NCBI]
Genbank nucleotide accession
NC_047873.1 [NCBI]
CDS location
range 33968 -> 35767
strand +
CDS
ATGGCTACAGCACCAAAGACTACGGTCACCTACAACCTGAACGGGACCGACAGGGACTTCCAGATCCCTTTCGAGTACCTTGCCCGTAAGTTTGTACAGGTGACCCTCGTGGGCGTGGACCGAAAGGTCCTTACCCTGAACATCGACTATCGGTTCACGCAACGGACGATCATCACGACCACCAAAGGGTGGGGGCCTGCTGATGGCTATCAGTTGATCGAGATCCGTCGATACACGTCAGCAACCGAACGTCTCGTGGACTTCAGTGATGGCTCCATCCTGCGTGCATACGACCTCAACACCGCTCAGGTTCAATCCCTTCACATCGCTGAAGAGGGTCGTGACATCGCCACCGATACCATCGGGGTGAACAATGACGGTGACCTTGATGCCCGTGGCCGCAAGATCGTGAACGTTGCCGATGGTACGAGCGACTTCGATGCTGTCAACCTCCGCCAGCAGCGCTTGTGGGCAGGTTCCGCAATGAACCAAGCAGACCGAGCCAAGTCTGAGGCAGACCGAGCAACCACGCAGGCAGACCGTGCGACCGCTCAGGCGCAAGCATCAGCGGGGTCTGCTGCAACCTCGAAGGCTCAGGCGGACGAGTCCCTTAAGTGGGCCGGTGAGTCCTACACCCATCGTCAGGCGTCCGCTGCGTCCGCTGCTGCGTCCCTTAAGTCCGCTCAGGATGCTGCTGGGTCCAACTCGGCTGCTGCCGCTCAGGCTGCTGAGGCTACCAGACAGGCTGGCTTGGCTACCTCTAACGGTGCCGCTCAGGTGTCCCTTGCGACCACTCAGGCGAACCGCGCTAAGGATGAAGCTGATCGTGCAACCGCGCAGGCTAACCTTGCGACCACTAACGGTGCCGCGCAGGTGTCCCTTGCGAAGGCTCAAGCAGACCGTGCAACATCTGAGGCTGACCGCGCAAAGTCCGAGGCCGATAAGCTGTCAGGCATGAACGGGCTGGCGAACGCCATTGAGTCCACCGCAGGGAACACCGTTAAGTTCAAGGATGGCTGGGCAATAAGCGCCCAAGGGGTCACGACGAACAATTTCTGGTCCCGCAATGGTGCATCCTTTGAGTTCGATAAGGGTATGATCGTTCGTGGCAACATCGACGTTCTTGGTAACATCGACGCGAACAACCTGACATCGAAGGTTGGCTCCCTGAACCTGAAGCCTGCAAGCGCTGGGGCGAACACCCATGTGTGGTTCAGGATGCCGGATGGTGTAACAGAGAACGCCCTGATTTACGTGGACTCTGGTGGCACCATGCACTTCAGACCACGCGCACAAGCAGACTACCTCACACTGTCAGCCGATGGCTCAGTGAATATGCGAAACACCCTGCGTATCTCAGGGGGTGGGGCTATCATCACTGGCCGGGTAACGACCGATGAGGTGATGTCGAACGGCACTGTTTGGGCAGGTGGTGGTCAATCTTGGATGGCAACTGACGGCAACATCTACGGACCTGTTTGGGGTGGATACCTGTCCAACAGGATCGCCGCTAAGCAGAACGCGCACCACTTCCAAGCTGGGCGTGTTGGTGTTGGCGCTCCGGGTGGTGGATATCGCCAGTTCCGAGTGAACTTCCATGCCCCTATGGGTGGCCCTACTGTCCAGATCACAATCTACCGACCAGCGCTTCACGTAGCTGTTGGTGCCCGTGGTGAGGCTTGGGTGGACGGGATTGACGAGAACGGCTTCACCTGCTGGGTCCACTGCGAAGCTGGCGCTGTATGGGACACTTACATTGATTGGATGGCCAGCCCTGCTGTGAATGCTGCGGGCGGCTAA

Tertiary structure

PDB ID
8a1df14644efb4065b801ba288fb1491eced476119a8fc95baab001230ee3d7a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7235
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequences of Pseudomonas fluorescens Bacteriophages Isolated from Omaha, NE Freshwater Samples Lu,G., Luhr,J., Stoecklein,A., Warner,P. and Tapprich,W. 2017-03-23 — GenBank