Protein

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Genbank accession
CAB4242116.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MAKFYSPAILGQEEYQAETIVLKLVLMPGAKGDQGYQGIQGIQGIQGIQGDQGIQGEKGDKGDQGIQGEKGDQGDQGIQGPAGALGNLTVFTPIAYDINTNTLTFDQEAENTANDGRYLLKGEIIDGGVI
Physico‐chemical
properties
protein length:130 AA
molecular weight: 13643,95050 Da
isoelectric point:4,14557
aromaticity:0,06154
hydropathy:-0,41923

Domains

Domains [InterPro]
IPR050149
28–84
IPR050149
IPR008160
29–86
IPR008160
CAB4242116.1
1 130
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4242116.1 [NCBI]
Genbank nucleotide accession
LR797829 [NCBI]
CDS location
range 8214 -> 8606
strand +
CDS
ATGGCTAAATTTTACTCGCCAGCGATCTTAGGACAAGAAGAGTACCAAGCCGAAACAATAGTATTAAAACTAGTTTTGATGCCAGGAGCTAAGGGTGACCAAGGCTATCAAGGTATTCAGGGAATTCAAGGAATTCAAGGTATTCAGGGAGACCAAGGAATACAGGGGGAAAAGGGTGACAAAGGTGACCAGGGTATCCAAGGTGAAAAGGGAGACCAGGGAGATCAGGGTATCCAAGGACCAGCAGGAGCATTGGGAAACCTAACAGTATTTACACCAATCGCGTATGATATAAATACGAATACGCTTACATTCGACCAAGAAGCAGAAAACACCGCTAACGATGGTAGGTATTTGCTAAAAGGTGAGATAATTGATGGAGGAGTGATTTAA

Tertiary structure

PDB ID
8a8a09fae92f820821c2d7729ad7ea8b0e0e2418696af2e1d4ae4d8393527116
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7315
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50