Protein

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Genbank accession
WCS65177.1 [GenBank]
Protein name
upper tail fiber
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,97
TF
Evidence Phold
Probability 1,00
Protein sequence
MYKIKDVETRIKNDGVDLGDIGCRFYTEDENTASIRIGINDKQGRIDLKAHGLTPRLHLFMEDGSIFKNEPLIIDDVVKGFLTYKIPKKVIKHAGYVRCKLFLEKEEQKIHVANFSFNIIDSGIESAVAKEIDVKLVDDAITRILKDNATDLLSKDFKEKIDKDVTSYIEKNESRFKGAKGDKGEPGQPGAKGDTGKKGEQGTPGKNGTVVSINPDTKMWQIDGKDTDIKAEPELLEKINIANVEGLEDKLQEVEKIKDTTLNDSKTYTDSKIAELVDSAPESMNTLRELAEAIQNNSISESVLQQIGSKVSTEDFEGFKQSLNSLYADKNHSHTIKQIEGLENALSKKSDINHSHDERYLLSSNAFTKEEADKLYQPIGSSQPSLNIWTGSETEYNYLYQKDPNTLYLIKG
Physico‐chemical
properties
protein length:412 AA
molecular weight: 46129,23620 Da
isoelectric point:5,23865
aromaticity:0,06553
hydropathy:-0,68786

Domains

Domains [InterPro]
IPR018913
4–141
IPR018913 G3DSA:1.20.5.320 Coil PF12789 IPR056923
G3DSA:2.60.40.3350
14–125
G3DSA:2.60.40.3350
WCS65177.1
1 412
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage ASZ22RN
[NCBI] 		3027324 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCS65177.1 [NCBI]
Genbank nucleotide accession
ON513432.1 [NCBI]
CDS location
range 21688 -> 22926
strand +
CDS
ATGTACAAAATAAAAGATGTTGAAACGAGAATAAAAAATGATGGTGTTGACTTAGGTGACATTGGCTGTCGATTTTACACTGAAGATGAAAATACAGCATCTATAAGAATAGGTATCAATGACAAACAAGGTCGTATCGATCTAAAAGCGCATGGCTTAACACCTAGATTGCATTTGTTTATGGAAGATGGCTCTATATTCAAAAATGAGCCCCTTATTATCGACGATGTTGTAAAAGGGTTCCTTACCTACAAGATACCTAAAAAGGTTATCAAACACGCTGGTTATGTACGTTGTAAGCTGTTTTTAGAGAAAGAAGAACAAAAAATACATGTCGCGAACTTTTCTTTCAATATCATTGATAGTGGTATTGAATCTGCTGTAGCAAAAGAAATCGATGTTAAATTGGTAGATGATGCTATTACGAGAATTTTAAAAGATAACGCGACAGATTTATTGAGCAAAGACTTTAAAGAGAAAATAGATAAAGATGTCACTTCTTACATCGAAAAGAATGAAAGTAGATTTAAAGGTGCGAAAGGTGATAAAGGCGAACCGGGACAACCTGGTGCGAAAGGTGATACAGGTAAAAAGGGAGAACAAGGCACACCCGGTAAAAACGGTACTGTAGTATCAATCAATCCTGACACTAAAATGTGGCAAATTGATGGTAAAGATACAGATATCAAAGCAGAACCTGAGTTATTGGAAAAAATCAATATCGCAAATGTTGAAGGGTTAGAAGATAAATTGCAAGAAGTTGAAAAAATCAAAGATACAACTCTCAACGACTCTAAAACGTATACGGATTCAAAAATTGCTGAACTAGTTGATAGCGCGCCTGAATCTATGAATACATTAAGAGAATTAGCAGAAGCAATACAAAACAACTCTATTTCAGAAAGTGTATTGCAACAGATTGGCTCAAAAGTTAGTACAGAAGATTTTGAGGGATTCAAGCAATCATTAAACAGTTTGTATGCAGATAAAAATCATAGTCATACAATCAAACAGATTGAAGGATTAGAAAATGCTTTATCAAAAAAATCAGACATAAATCACAGTCATGATGAACGTTATCTTTTATCATCAAATGCTTTTACAAAAGAGGAAGCAGATAAACTTTATCAACCTATCGGTTCTTCGCAGCCGTCACTGAATATTTGGACAGGCAGTGAAACAGAATATAATTATTTGTATCAAAAAGACCCTAATACACTTTACTTAATTAAGGGGTGA

Tertiary structure

PDB ID
14e1829d9dd21f5a99fe836115021113270b6971d07663ac15f6156b1e83f63a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8041
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Easy to use experimental pipeline for the analysis and engineering of Staphylococcus aureus clinical isolates Kaluski,L., Stefanczyk,E., Glowacka,A., Szczypkowska,A., Gawor,J., Empel,J., Orczykowska-Kotyna,M., Zuchniewicz,K., Gromadka,R. and Lobocka,M. 2020-10 — GenBank