Protein

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Genbank accession
UOF79584.1 [GenBank]
Protein name
collagen alpha 1
RBP type
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MRKLRWLLLMAVAACQPLPSEPRADYGGGLILEAYHQRLLGQITDGQSGGAGVYCAWAVIDGRTGALVGVETSNRTVTAAGTTDEVLGYDPGTTVGATITDDPKRMRKVTTIMVYNSRVIPLAIQFYVQKMAGAPTGYAGTYRITPSFSIPAGGMLLYSAETGWRVYDATGQFGIAGPTGPQGATGATGPTGSDGWTYVKLANDFGNTSGTLADVTGMSFSASANTNYEIEVFGNFTTAATTTGMGMAFTVPASATVAGTMWHPVSTTALGSSFTRATGAATGNTASVDAAAPSIVPFTGKWTVKNANTAGTVQLQMRTEVSTSAATLLGGSVWLKYRTIS
Physico‐chemical
properties
protein length:341 AA
molecular weight: 35273,40470 Da
isoelectric point:8,46046
aromaticity:0,08798
hydropathy:0,05132

Domains

Domains [InterPro]
G3DSA:1.20.5.320
169–216
G3DSA:1.20.5.320
UOF79584.1
1 341
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Caudoviricetes sp.
[NCBI] 		2832643 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UOF79584.1 [NCBI]
Genbank nucleotide accession
MW202627 [NCBI]
CDS location
range 1 -> 1026
strand +
CDS
ATGCGAAAGCTACGCTGGCTGTTACTGATGGCGGTGGCGGCGTGCCAGCCATTACCGTCTGAACCGCGTGCAGACTACGGAGGCGGCTTGATTCTGGAAGCGTATCACCAGCGACTGCTGGGGCAGATCACCGATGGCCAGTCCGGCGGTGCGGGCGTGTATTGCGCGTGGGCCGTGATCGACGGGCGCACGGGGGCGCTGGTGGGCGTCGAAACGTCCAACCGCACTGTGACGGCGGCGGGCACGACGGACGAAGTGTTGGGCTATGATCCCGGCACCACGGTCGGCGCCACGATCACGGATGATCCGAAGCGGATGCGCAAGGTGACCACGATCATGGTCTACAACAGCCGCGTGATTCCGCTGGCGATCCAGTTCTACGTGCAGAAGATGGCCGGGGCGCCGACCGGGTACGCCGGGACGTATCGCATTACGCCATCGTTTTCGATCCCCGCAGGCGGGATGTTGCTGTACTCAGCGGAAACGGGCTGGCGCGTCTACGACGCCACGGGCCAGTTCGGCATTGCGGGGCCGACCGGGCCGCAGGGCGCGACGGGGGCCACCGGGCCGACCGGTTCGGACGGCTGGACCTACGTGAAGCTGGCGAACGACTTCGGCAACACGTCGGGCACGCTGGCCGATGTCACCGGCATGAGTTTCAGCGCGAGCGCGAATACCAACTACGAGATTGAGGTATTCGGCAACTTCACGACCGCCGCGACGACGACGGGCATGGGCATGGCGTTCACGGTGCCCGCGAGCGCAACCGTGGCGGGCACGATGTGGCACCCGGTCAGCACGACGGCGCTGGGCTCGTCCTTCACGCGAGCCACGGGGGCGGCGACGGGCAACACGGCCAGTGTGGACGCGGCAGCGCCCAGCATTGTGCCATTTACGGGCAAATGGACCGTGAAGAACGCGAACACGGCGGGCACGGTCCAGTTGCAGATGCGCACCGAAGTCTCGACCAGCGCGGCCACGCTGTTGGGCGGGTCCGTGTGGCTCAAATACCGGACGATTAGCTGA

Tertiary structure

PDB ID
21770541d36862cbbfbcedc14ff660d91934efc0305600f65bddcffb7d03cc42
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6081
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50