Protein

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Genbank accession
ADB81659.1 [GenBank]
Protein name
gp12 short tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
Protein sequence
MATNTLNHISDESKYKTFNPAGTSFPSNITNVQAALAALKPIAVNGVPDATETVKGIIRIATQQEVNDGDSANTVVTPKTLKERLGNPQATETTIGLTRYATTPEAIAGTVSTAAVVPTGLKGAIDNAFTTRTAKESVLGVIKLATIAMAEAGTDDTSAMTPLKTQRAIAKATAVLPVYGPATEAVSGTVRIATNGQVAQGTLRDGYAVSPSGLASLTATSSRRGIARSATIAEVNANTAGDIFVTPNGLNQRVGTTSTKGLVKLTTTVGSGDANTALAYNADVVHTRGGQTINGNTTFGTARVNGRLDMGSGFINNQQIATVNMLVDSVPIGTIIMWPGQNPPSSDWMHCNGALLNRSDPQFSTLFSIIGILYGGDATRFALPDMRGMFPRGVGKSNIMNQYSGNDSKGKPGLGAGCGGASLGQSMPQSVRKHKHESGWGEHYKRSDARNGCTVRNGYLGSNRSDYDNYKYFTNDGDEVEPANIRDSFGTMNTEGLMGDENRPWSIALNFVIKVR
Physico‐chemical
properties
protein length:516 AA
molecular weight: 54119,01460 Da
isoelectric point:9,05802
aromaticity:0,05620
hydropathy:-0,27733

Domains

Domains [InterPro]
G3DSA:2.10.280.10
246–283
G3DSA:2.10.280.10 IPR037053 IPR044916
SSF69349
246–341
SSF69349 IPR027448
IPR015173
248–310
IPR015173 SSF88874
IPR011083
333–391
IPR011083
ADB81659.1
1 516
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage CC31
[NCBI] 		709484 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADB81659.1 [NCBI]
Genbank nucleotide accession
GU323318.1 [NCBI]
CDS location
range 87490 -> 89040
strand +
CDS
ATGGCTACTAATACTCTAAATCACATCAGTGATGAATCAAAATATAAAACGTTTAACCCGGCGGGAACAAGTTTCCCGTCAAATATAACAAACGTTCAAGCTGCTCTTGCAGCTTTAAAACCAATTGCTGTGAATGGTGTTCCTGACGCTACTGAAACTGTAAAGGGCATTATTCGTATTGCTACCCAACAAGAAGTAAATGATGGCGATTCGGCGAATACTGTGGTCACTCCGAAAACGTTAAAAGAGCGTTTAGGTAATCCTCAGGCTACAGAAACTACAATTGGTCTTACACGATACGCAACTACTCCAGAAGCTATCGCTGGAACAGTTTCTACTGCAGCTGTAGTTCCGACCGGTTTAAAAGGCGCAATTGATAATGCCTTCACAACTCGTACAGCAAAAGAATCTGTTTTGGGTGTAATTAAATTAGCTACTATTGCAATGGCTGAAGCCGGCACTGACGATACTTCAGCAATGACTCCACTTAAAACTCAGCGTGCAATTGCTAAAGCTACTGCAGTTCTTCCAGTGTATGGTCCAGCAACTGAAGCTGTCAGCGGTACAGTTCGTATTGCTACTAATGGTCAAGTTGCTCAAGGAACATTACGCGATGGTTATGCTGTATCTCCTAGCGGATTAGCTTCTTTAACTGCAACCTCTTCTCGTCGCGGAATTGCTCGTTCAGCTACAATAGCTGAGGTTAATGCAAACACCGCTGGAGATATTTTCGTTACTCCTAACGGATTGAACCAAAGAGTCGGCACTACTTCAACAAAAGGTCTTGTTAAATTAACAACTACCGTAGGTTCTGGCGATGCTAATACAGCTTTAGCTTATAACGCTGATGTTGTTCATACCAGAGGCGGACAAACAATTAATGGAAACACAACATTCGGTACTGCTCGAGTAAACGGTCGTTTAGATATGGGGTCTGGCTTTATTAACAACCAGCAAATTGCTACAGTTAATATGTTAGTTGATTCTGTTCCTATTGGAACAATTATCATGTGGCCTGGTCAAAACCCTCCAAGTTCAGATTGGATGCATTGTAATGGAGCTTTACTAAACAGAAGCGACCCACAATTCTCTACGTTGTTCAGTATTATCGGTATTCTGTACGGTGGTGATGCTACACGATTTGCTTTACCTGATATGCGTGGTATGTTCCCTCGTGGTGTAGGTAAATCAAATATCATGAACCAATATTCAGGAAACGACTCTAAAGGTAAACCTGGTCTTGGCGCTGGATGCGGCGGTGCGTCGCTTGGTCAATCTATGCCGCAATCTGTTCGTAAACACAAACACGAATCTGGATGGGGTGAACATTATAAGCGTTCAGATGCAAGAAATGGTTGTACTGTTCGCAACGGTTATTTAGGTTCTAATCGTTCAGATTATGATAACTACAAGTATTTTACCAATGATGGCGATGAAGTTGAACCAGCCAATATTCGTGATTCATTCGGTACAATGAATACAGAAGGTCTAATGGGCGATGAAAACCGTCCTTGGTCAATTGCTCTAAACTTTGTAATAAAAGTAAGATAA

Tertiary structure

PDB ID
b8564fa60b8c02088856f4022e93ae098d0bfd00f39ccf863708ebebaab27392
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6972
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomes of the T4-related bacteriophages as windows on microbial genome evolution Petrov,V.M., Ratnayaka,S., Nolan,J.M., Miller,E.S. and Karam,J.D. 2010 21029436 GenBank