Protein

View in Explore
Genbank accession
AKP24432.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MITPELIPSPFAAQGDKDPIPQTSSTGFANLRDGYTPDYEISLASNNPQAKAVERKIQNQLFFIATQNAQAWQRQMAPPWFQGMPGGYEQNAEVVRVGNDGIMRRYRSMVNANASDPLSSTTWEEQPAWSAMRSNIPMPAGGPGLSSGGEVITTGRNFNDLLNGTWEFFSDSVVIASQNAPVYPASAGAAAGMLEAKSWVSGANTFCVQRYTDRVGNVAVRGLNAGAWTNWMYAVNVMALQQGRVTYGVAAGSANAYTLTLVPQLQGGLVDGMILRVKFNTMNTGASTINVSGLGAKAIVGAANFPLTGGELGQGLIAELVFDAAGDRWRILAGAPRIQVGNADQDYQAPSWKQVKDYVASQKLTEVDWADVVNKPNVAIQDTTPWFANLELSDARPFIDFHFNNNRAKNFDYRLISEADGSLAFYSRQGSAGPTQDILFNRNSVTFFQPRLDVAKNLAYIANSGPLWQNTTADQPGWKFTFAQGVDANNNAVIAVNTTNPDGSYRSQVMRWDWASTNVIFNNRPLFAGQYTPWDSGNFDPSTKLTVNATNQIAGPTGIRNTNGNTGNMNTWGSGSTTASYGNAAIQIFGKGGGEPAAIYFDNSQTGWYLGMDKDGQLKRAGWSLGNNSYVITDELNIRNHINGMAARPVWGGNEFWGPWNFNPNTKLTIKAGTQETSSTAIYSGTMPFAPIASLSDYSQAPLTIYNAPTGPSAKPAVIAFIRPGNWGAFFGLDTDNKLKWGGGSLGNSSREIADSSNIMNLWAANPTAPTWNGQTVWRSGNFDPATKVDLNAPNATNGNMIFNRIAGTGSGIASSGRVGAISLQNGATAGAAAAVTFERGGGFFVNFGLDTDNVLKVGGGNLGANAYPVIHAGNYNNYINQALVQVGLGGVGSYGIFAVLDNAAPTATVQPGVVVDGSILIYSSCAANYNSGQRPAGTWRCMGYVVNRDANTPDSATLFQRVT
Physico‐chemical
properties
protein length:964 AA
molecular weight: 102880,20060 Da
isoelectric point:5,88445
aromaticity:0,10477
hydropathy:-0,25539

Domains

Domains [InterPro]
cd19958
152–231
cd19958
AKP24432.1
1 964
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_CEB_DP1
[NCBI] 		1675014 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AKP24432.1 [NCBI]
Genbank nucleotide accession
KR869157 [NCBI]
CDS location
range 31670 -> 34564
strand +
CDS
GTGATCACACCCGAACTGATCCCCAGTCCGTTTGCCGCTCAGGGCGATAAAGACCCGATTCCACAAACCTCCTCCACTGGCTTCGCAAACCTTCGCGACGGCTATACGCCGGACTACGAAATCAGCCTGGCGTCGAACAACCCGCAGGCCAAAGCGGTCGAGCGGAAAATTCAAAACCAACTCTTCTTCATCGCGACCCAGAACGCACAGGCGTGGCAGCGACAAATGGCGCCGCCGTGGTTTCAGGGCATGCCTGGCGGCTACGAACAGAATGCAGAAGTCGTGCGCGTCGGAAATGACGGCATAATGCGGCGTTATCGTTCCATGGTGAATGCCAATGCGAGCGATCCTCTCAGCAGCACGACTTGGGAAGAACAACCCGCATGGTCGGCGATGCGATCCAACATCCCGATGCCGGCCGGAGGCCCAGGCCTATCTTCTGGCGGAGAAGTCATCACGACCGGCCGCAACTTCAACGACCTGTTAAATGGGACGTGGGAGTTCTTCTCTGATTCAGTGGTTATCGCTTCTCAGAATGCCCCCGTATATCCGGCTTCCGCTGGTGCCGCTGCTGGCATGTTGGAGGCGAAATCTTGGGTGTCCGGAGCCAATACGTTCTGCGTCCAACGCTACACTGATCGCGTCGGGAACGTCGCTGTGCGCGGGCTTAATGCCGGAGCGTGGACCAACTGGATGTATGCGGTAAACGTCATGGCCCTTCAACAAGGTCGGGTCACCTATGGAGTCGCGGCCGGATCGGCGAACGCTTACACGTTGACGCTAGTTCCGCAGCTCCAAGGCGGCCTGGTGGATGGCATGATTCTTCGGGTCAAGTTCAACACCATGAACACCGGCGCCTCCACCATCAACGTCTCCGGACTCGGCGCCAAAGCCATCGTCGGCGCGGCCAACTTCCCTCTCACCGGCGGCGAACTTGGCCAAGGACTCATCGCTGAGCTTGTATTCGACGCAGCAGGCGACCGCTGGAGAATCCTCGCAGGCGCGCCACGCATCCAAGTTGGCAACGCCGATCAAGATTACCAGGCCCCCAGCTGGAAACAGGTGAAGGATTACGTCGCGTCCCAAAAGCTGACTGAAGTGGACTGGGCTGACGTCGTCAACAAGCCGAACGTCGCTATCCAAGACACTACGCCGTGGTTCGCCAATCTGGAGTTGTCTGACGCTCGGCCTTTCATCGATTTCCACTTCAACAACAACCGCGCCAAAAACTTCGACTATCGGCTGATATCTGAAGCAGACGGATCGCTGGCTTTCTATTCGCGGCAGGGGTCTGCTGGGCCTACCCAGGACATCCTGTTCAACCGAAATTCCGTGACTTTCTTCCAGCCGCGACTCGATGTGGCGAAAAACCTCGCGTACATCGCGAACTCTGGCCCCCTTTGGCAGAACACCACCGCCGATCAGCCCGGTTGGAAATTCACCTTTGCACAAGGCGTGGACGCGAACAACAACGCGGTGATCGCAGTCAATACCACCAATCCGGACGGTTCCTATCGTTCACAGGTCATGCGATGGGACTGGGCGTCCACGAACGTCATATTCAACAACCGTCCGCTCTTCGCCGGTCAATACACCCCTTGGGATTCCGGGAACTTCGATCCTTCCACCAAGTTGACGGTGAATGCCACGAACCAAATCGCCGGCCCAACCGGGATTCGGAATACCAACGGCAACACCGGCAACATGAACACCTGGGGTTCCGGCTCCACGACGGCATCCTATGGCAATGCTGCCATTCAAATCTTCGGAAAAGGGGGCGGTGAGCCTGCCGCGATCTATTTCGACAACTCCCAGACCGGATGGTATCTGGGTATGGACAAGGATGGACAGCTCAAGCGGGCCGGCTGGTCACTCGGCAACAACTCTTATGTCATCACCGATGAATTGAACATCAGAAACCACATCAACGGTATGGCAGCAAGGCCGGTTTGGGGCGGAAATGAATTCTGGGGGCCGTGGAACTTCAATCCTAACACCAAGCTGACCATCAAAGCCGGCACCCAGGAGACTAGCAGCACTGCGATATACAGCGGAACTATGCCGTTCGCCCCAATCGCATCGCTGTCCGATTATTCTCAGGCCCCTTTGACGATTTACAACGCGCCCACTGGTCCGTCTGCAAAGCCGGCCGTCATCGCGTTTATTCGCCCTGGGAACTGGGGCGCGTTCTTCGGCCTCGACACCGACAACAAGCTGAAATGGGGCGGCGGATCGCTCGGCAATAGCTCCAGGGAAATCGCCGATTCCAGCAACATCATGAATCTTTGGGCTGCCAACCCGACCGCGCCGACTTGGAACGGCCAAACGGTTTGGCGATCCGGAAACTTCGATCCGGCGACTAAAGTGGATCTGAACGCGCCAAACGCCACCAACGGCAACATGATTTTCAACCGCATCGCCGGAACAGGCAGCGGTATTGCTTCGTCCGGCCGCGTCGGCGCAATCAGCCTCCAGAACGGCGCAACGGCAGGCGCGGCCGCAGCCGTAACATTCGAGCGGGGCGGAGGTTTCTTTGTCAACTTCGGCCTGGATACCGACAACGTTCTCAAAGTGGGTGGCGGAAACCTGGGGGCAAATGCCTATCCGGTCATCCACGCCGGGAACTACAATAACTACATCAACCAGGCGCTGGTTCAGGTGGGTCTTGGCGGAGTCGGTTCCTATGGCATCTTTGCGGTTCTGGACAATGCCGCTCCAACCGCGACCGTTCAACCGGGAGTGGTTGTGGACGGTTCCATTCTCATCTACTCGTCTTGCGCCGCAAACTACAATAGCGGTCAAAGGCCTGCCGGAACTTGGCGCTGCATGGGATATGTAGTCAACCGGGATGCCAACACTCCTGACTCCGCGACCCTTTTCCAGCGAGTGACGTAA

Tertiary structure

PDB ID
eca7a652285ba38430e70f324877b93302f40d5e607a173049daa453301b00b5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2512
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Pseudomonas aeruginosa Phage vB_PaeM_CEB_DP1 Pires,D.P., Sillankorva,S., Kropinski,A.M., Lu,T.K. and Azeredo,J. 2015 26404589 GenBank