Protein

View in Explore
Genbank accession
ACY35931.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MPATTLEGIWFPDESSPVAPLEGLMLAQANSVDLALTKLRRDAAVPVLDREARDNMFPQAAQGNSVYRLDRGYVERYYGQYNAATNPGGKDSAGWYAPSGTTLGIYNVPWAVAADFPFGASPQRLGEMLLADPGVPYRVRTAVRTEIGSSAGGTRWDMQVGMGGGFDSPIVDQVDAIVCDEAVRFRTTTSSLSTKVFRGAQRVSAQASLAYGTALGLQTRYNRSFVVEVIAA
Physico‐chemical
properties
protein length:232 AA
molecular weight: 24909,71630 Da
isoelectric point:5,26496
aromaticity:0,09483
hydropathy:-0,14698

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Clavibacter phage CMP1
[NCBI] 		686439 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clavibacter michiganensis subsp. michiganensis
[NCBI] 		33013 Bacteria > Actinobacteria > Actinobacteria > Micrococcales > Microbacteriaceae > Clavibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACY35931.1 [NCBI]
Genbank nucleotide accession
GQ241246.1 [NCBI]
CDS location
range 34751 -> 35449
strand +
CDS
ATGCCCGCCACCACCCTAGAGGGAATTTGGTTCCCCGATGAGTCCTCGCCTGTCGCTCCGCTGGAAGGGCTCATGCTGGCGCAGGCCAACAGCGTAGACCTGGCCCTGACCAAGCTGCGCCGGGACGCGGCCGTCCCGGTCCTTGACCGCGAGGCTCGCGACAACATGTTCCCGCAGGCTGCTCAGGGCAACTCCGTCTACCGGCTGGATCGCGGCTACGTCGAGCGATACTACGGCCAGTACAATGCTGCGACAAATCCAGGGGGCAAGGATTCCGCGGGCTGGTATGCGCCGTCTGGAACAACTCTCGGAATCTACAATGTACCGTGGGCTGTTGCTGCCGACTTCCCCTTCGGCGCTAGCCCTCAGCGGCTTGGTGAAATGCTGCTCGCGGACCCGGGTGTGCCTTATCGCGTGCGCACCGCCGTCCGCACCGAGATTGGCTCAAGCGCAGGTGGCACCCGATGGGATATGCAGGTTGGGATGGGTGGAGGTTTCGACTCTCCCATTGTAGACCAGGTAGATGCAATTGTTTGCGACGAAGCCGTGCGGTTCCGCACTACAACTTCTAGTCTTTCGACTAAGGTGTTTCGGGGGGCACAGCGGGTGTCCGCGCAGGCCTCTCTTGCTTATGGTACCGCGCTTGGTCTTCAGACGCGGTACAATCGTTCATTTGTGGTTGAAGTTATTGCAGCGTAA

Tertiary structure

PDB ID
7857b456d0de5bbb0532c8a3664da64e0520e41a2c72e095403aead0f1af285a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8422
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50