Protein

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Genbank accession
YP_004508456.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,84
TF
Evidence Phold
Probability 1,00
Protein sequence
MFDFPLSPVLNQVYTEGDRSWTWNGKSWVAIVSIGDQGEPGVQGPQGFQGNQGSQGIAGSNGTQGPQGFQGVAGSNGTQGPQGFQGNQGSQGIAGSNGTQGPQGFQGVAGSNGTQGPQGFQGSQGIAGSNGTQGPQGFQGVAGSNGTQGPQGFQGNQGTQGIAGTQGPQGFQGFQGSSGASGYTYSPTAPSSPNVGDEWTNSDDPRLPTYRYINDGNTTQWVELNASGESGPQGTQGVQGVQGTQGAQGPQGVPGSVMRLCIAASDESTALTTGNNRVRFRMPRAMTVTEVRATVNTAPTGSTLIVDINEGDTPVSILSTKISIDATEFSSVTAAVPPVISDTSLANDALISIDIDQIGATVPGAGLKVWIIGVEA
Physico‐chemical
properties
protein length:376 AA
molecular weight: 37914,57260 Da
isoelectric point:4,18570
aromaticity:0,06383
hydropathy:-0,42553

Domains

Domains [InterPro]
IPR050149
35–255
IPR050149
IPR008160
35–92
IPR008160 IPR008160 G3DSA:1.20.5.320
YP_004508456.1
1 376
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CRM01
[NCBI] 		1026955 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp.
[NCBI] 		1131 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004508456.1 [NCBI]
Genbank nucleotide accession
NC_015569.1 [NCBI]
CDS location
range 28846 -> 29976
strand +
CDS
ATGTTTGATTTTCCACTATCTCCGGTACTCAATCAAGTATACACTGAAGGTGACAGGTCATGGACCTGGAATGGAAAGTCTTGGGTTGCCATAGTAAGTATTGGTGATCAAGGAGAACCTGGAGTACAAGGTCCTCAAGGTTTTCAGGGAAATCAAGGTTCTCAAGGTATAGCTGGAAGTAACGGAACTCAAGGCCCACAAGGTTTCCAAGGTGTTGCTGGTTCTAACGGAACTCAAGGTCCTCAAGGTTTTCAGGGAAATCAAGGTTCTCAAGGTATAGCTGGAAGTAACGGAACTCAAGGCCCACAAGGTTTCCAAGGTGTTGCTGGTTCTAACGGAACTCAAGGTCCTCAAGGATTCCAGGGATCCCAAGGTATAGCTGGAAGTAACGGAACTCAAGGCCCACAAGGTTTCCAAGGTGTTGCTGGTTCTAACGGAACTCAAGGTCCTCAAGGATTCCAGGGAAATCAAGGAACTCAAGGTATAGCTGGAACTCAAGGCCCTCAAGGTTTTCAAGGTTTTCAAGGTTCTTCAGGTGCATCTGGATATACATATTCACCAACTGCACCATCTAGTCCAAATGTAGGTGATGAGTGGACAAATAGTGATGATCCAAGACTACCTACTTATAGATATATTAATGATGGAAATACTACACAATGGGTCGAACTAAACGCATCTGGAGAATCTGGACCACAAGGAACTCAGGGTGTTCAGGGAGTACAAGGAACTCAAGGAGCACAAGGTCCACAAGGCGTTCCAGGTAGTGTAATGCGTTTGTGTATTGCTGCCTCCGATGAATCCACTGCGCTAACTACGGGAAATAATAGAGTTAGGTTCAGGATGCCAAGAGCTATGACTGTTACGGAAGTTAGAGCAACGGTAAATACTGCACCTACTGGATCTACATTAATTGTAGATATCAATGAAGGAGACACACCAGTATCTATACTAAGTACAAAGATTTCAATCGATGCTACAGAATTTAGTAGTGTTACTGCTGCTGTTCCTCCAGTTATATCAGATACTTCATTAGCTAATGATGCGTTGATATCAATTGATATTGATCAAATTGGTGCTACTGTTCCCGGTGCTGGATTAAAAGTTTGGATAATAGGAGTTGAAGCATGA

Tertiary structure

PDB ID
e12f657fc0ed4b7e64d66434a798efbfbefff08e40d2762f683d6ce762ef87e1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7352
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50