Protein

View in Explore
Genbank accession
AOT25402.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MARVGGSYESVVRGVSEQAPQDRRSGQMWEQVNMISDPVRGLSRRKGSQYQNAQRILGTDVSELQVMDDTPTMVVQDFTVNGVDYDLIYSKTRRTTLGPMYCYDKTNKTFLPITGTGVIWDALVANGVSGLTNIGRFLFIAAHGYYPTYTTTQVIEEDSAAKRITLWVRNGDYNRNYRFRYTDTSGVTRTASYTTPSATYAGVLDTSQVPVPTIDVSDNPDADTINRRLAKFNSEMSAYNKQVADITNTYNMAVTAWVRSSSAAIQPSVVATELASVIQAETGGTLHVEGTYIHIDYDANIRAGTAVDGGDNTYLRAVVSSTDDPAQLTPQAWYGKVIRVKSTTSQSTNPYYVRAEPQNAGDASVYQYGSVTWRECPGVETTPTSAFAFATVSGGVLYVGSSPAELNTLTGRTDTPTFYKSSVGDLVTSPLPAFLNNRQIDYLGNFQDRLLVGCGSTIFASRPGSYLNWFRASVLVVKDNDPVEMYALGSEDDTIVWDASFDRNHVMFGRKYQYMLPGRAMLSPSNPTIQIMSRIEDAVRAQPQSSGNFVFYAKDTQTKGSLHQIQIGATADSAESYECSQQLDKYLEGKPVQILCDQSPFNILVRTRSKFNGFYVYTYLDSMQGGERLFDSWSKWEWDEKLGSCVGVQKFEGELLVYTVRVNSTGGWLVCDKFTFDTDTTTVPMLDSWRSYTTQEEFPLWWDSSLEDNAAVAYRSTHEYFLLGSDYKSLDANIPEWREDVSHLVVGTKFPAYFAPTSPYIRDRRDRAVITGRLTVGAMTLSVSDTGGLEGTMQLPDRSVQMASFNGRLLSRQSNRAGVSPLVDTTVRVPIHREIREFKLYVSALTWLPLTVTGIEWIGQWFSNVKRV
Physico‐chemical
properties
protein length:868 AA
molecular weight: 96674,96560 Da
isoelectric point:5,35903
aromaticity:0,10945
hydropathy:-0,33041

Domains

Domains [InterPro]
IPR058003
1–52
IPR058003 IPR058003
Coil
222–242
Coil
AOT25402.1
1 868
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PP2
[NCBI] 		1897743 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOT25402.1 [NCBI]
Genbank nucleotide accession
KX756572 [NCBI]
CDS location
range 25016 -> 27622
strand +
CDS
ATGGCCCGAGTTGGTGGCAGTTATGAATCAGTAGTACGGGGCGTATCCGAGCAAGCTCCGCAGGACAGGCGCTCGGGCCAAATGTGGGAACAGGTCAACATGATATCTGACCCTGTGCGAGGCCTATCGCGTCGTAAGGGTTCGCAGTACCAGAATGCCCAGCGTATACTCGGAACTGATGTAAGTGAGCTGCAAGTTATGGACGACACACCTACTATGGTTGTTCAGGACTTCACGGTAAACGGTGTGGATTACGATTTAATATACTCCAAAACAAGAAGGACGACACTCGGGCCAATGTATTGCTATGACAAGACCAATAAGACCTTCCTGCCCATAACAGGCACAGGTGTTATCTGGGATGCTCTGGTGGCTAACGGTGTATCTGGACTGACTAACATCGGAAGATTCCTGTTTATTGCAGCTCACGGATACTACCCAACCTACACGACCACACAGGTTATAGAGGAGGACTCTGCTGCTAAGCGGATAACCCTGTGGGTGCGTAATGGGGACTACAACCGGAATTACAGATTCAGGTACACCGACACATCTGGTGTAACACGCACAGCGTCATACACAACCCCATCTGCGACGTACGCGGGTGTGCTGGATACTTCACAGGTTCCAGTACCTACTATCGATGTGTCGGACAACCCTGACGCAGATACCATAAACCGAAGACTTGCTAAGTTTAACTCTGAAATGAGTGCATACAACAAGCAGGTAGCTGACATAACGAACACATATAACATGGCCGTTACGGCATGGGTGCGCTCGTCATCAGCGGCTATACAACCTTCAGTAGTCGCCACCGAGTTAGCCTCTGTAATACAGGCAGAAACAGGTGGAACACTTCATGTTGAGGGTACTTATATCCACATCGACTACGATGCGAATATACGTGCAGGTACAGCTGTTGATGGTGGGGATAATACCTACCTACGTGCTGTTGTATCCTCCACTGATGACCCAGCGCAGTTAACACCACAAGCGTGGTATGGAAAGGTAATCCGGGTTAAGTCAACAACATCCCAGAGCACCAACCCGTACTACGTCAGGGCAGAGCCGCAGAACGCAGGAGATGCTTCTGTGTATCAATATGGCTCTGTAACGTGGCGGGAGTGTCCGGGTGTGGAGACTACACCTACATCAGCGTTCGCATTCGCCACGGTGTCGGGGGGTGTCCTCTATGTGGGTTCCTCACCTGCGGAGCTGAATACACTGACCGGGCGTACGGATACCCCTACCTTCTATAAATCCTCTGTTGGGGATTTGGTTACGAGTCCACTCCCTGCGTTCTTGAATAACCGCCAGATAGACTACCTTGGAAACTTCCAAGACCGTCTTTTAGTGGGATGCGGCTCCACGATATTCGCCAGTCGTCCGGGTAGTTACCTGAACTGGTTCCGGGCCTCCGTATTGGTTGTAAAGGATAACGACCCTGTTGAGATGTATGCTCTGGGTTCGGAGGATGATACGATTGTATGGGATGCCAGCTTTGACAGGAACCATGTGATGTTCGGCAGGAAGTACCAGTATATGCTGCCGGGCAGGGCTATGTTATCCCCATCTAACCCTACAATCCAGATAATGAGCCGTATCGAAGATGCTGTAAGGGCGCAGCCTCAGTCGTCAGGTAACTTCGTTTTCTATGCGAAGGATACCCAGACTAAGGGTTCCTTGCACCAGATACAGATAGGTGCTACGGCGGACTCTGCGGAATCCTACGAGTGTTCACAGCAGCTGGACAAATACCTAGAGGGTAAGCCTGTACAGATACTGTGTGACCAATCACCCTTCAATATCCTTGTTCGCACTCGCAGCAAGTTTAATGGGTTCTATGTATACACCTACCTTGATTCGATGCAGGGTGGTGAGCGGTTGTTTGACAGCTGGTCGAAGTGGGAATGGGATGAGAAGCTGGGGAGCTGTGTAGGTGTCCAGAAGTTTGAAGGTGAGCTTCTTGTTTATACTGTCCGGGTTAACTCTACAGGTGGTTGGTTGGTCTGCGATAAGTTCACATTTGATACGGATACTACAACCGTACCTATGCTGGACTCATGGCGCTCCTACACTACACAAGAGGAGTTCCCTCTTTGGTGGGATTCCTCCTTGGAGGATAACGCGGCAGTGGCGTACCGGAGCACTCATGAATACTTCCTTCTGGGTTCGGACTATAAGTCTCTGGATGCGAACATACCGGAGTGGCGGGAGGATGTCTCCCACCTTGTTGTAGGGACAAAATTCCCAGCCTACTTCGCCCCAACCAGTCCGTATATTCGGGATAGGAGAGACCGGGCAGTTATTACTGGCCGTCTTACTGTAGGCGCAATGACCCTATCCGTCTCCGACACGGGGGGATTGGAGGGTACTATGCAATTGCCGGACAGGTCTGTACAAATGGCTTCCTTTAATGGGCGGCTATTAAGCAGACAGTCAAACAGGGCAGGTGTGTCTCCACTAGTGGACACTACGGTTAGAGTTCCCATCCATAGAGAGATACGGGAGTTTAAACTCTACGTGTCTGCCCTTACGTGGTTGCCGCTCACTGTAACAGGTATAGAGTGGATTGGACAATGGTTCAGCAACGTTAAGAGGGTTTAA

Tertiary structure

PDB ID
58934eb6dc668e85b418688cdc679427042b786b068cf96e692e721130b7f5ba
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8555
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of bacteriophage vB_PcaP_PP2 infecting Pectobacterium carotovorum subsp. carotovorum, a new member of a proposed genus in the subfamily Autographivirinae Lim,J.A., Heu,S., Park,J. and Roh,E. 2017 28409265 GenBank