Protein

View in Explore
Genbank accession
QIN98065.1 [GenBank]
Protein name
putative tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MALVIHYTRNEDGTFDVKRYRDNPMNFVVNHVPDGVPVRVFIDEIGEDNDVTEDFEALKENATFHIVESAGGGAIKGVMKIFSVILKPLAKLLSPSVKGATSNLANSQADSPNNSLTDRNNKARPYERSYDICGTVQTIPNNLMTTYKVFNAAGKIVEYGYYDAGRGYLDIHPEGITDGDTRVSDITGTSVAVYAPYTSPNNTSTPQVMVGDPIEQGLYITVESNEVDGVVLKAPNGLGISFSYMSGYPSLSGNIGTIYDPTGGSDFSGVLVPNDTFSLVSAWTNTDVDLSGGGYQVLSVSEGTVTFIVPGGLIGRWQEIRPGSFFRGDGEASLQPDNTYEKTLTDWVSINRTEVERIVANIAAANGMYKDNGKSKTLASVTAEIQYQLLDENSTPYGPIYTAQGTVSGRTPDYNGVTIYADLPVVSRVRVRARRVTDLDFNFEGSVVDEITYVNLYGQTRDNTPHYGNRTTVHSMRKQTPRAAEVKQPQLRMIATEMVYKYLGNGVFEDTMTPNTQAVQSLIRLARDPDVGGLNLTVRNMDKLLAVQNEVEAYFGDKQAGEFCYTFDDYKTTMQDIVSTIADAIFCTPYRRGADILLDFERPRMGPEMVFTHRSKAGTSEKWTRTFNDAQVFDSLKFSYIDPKTNVKETITIPETGGLKTETYDSKGIRNYKQAFWAANRRHQKNILKKISVSFTATEEGIFALPNRAISVVKGSRMATYDGYITAVNGLTVELSQPVKFTSGDDHSLVLKLRDGGVQSVRVVPGAHDRQVIMTSVPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVPPFGRAFSNGFDNGFN
Physico‐chemical
properties
protein length:852 AA
molecular weight: 93922,94900 Da
isoelectric point:5,27275
aromaticity:0,09742
hydropathy:-0,36714

Domains

Domains [InterPro]
NF040662
352–832
NF040662
QIN98065.1
1 852
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage demigod
[NCBI] 		2713291 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN98065.1 [NCBI]
Genbank nucleotide accession
MT074431 [NCBI]
CDS location
range 26032 -> 28590
strand +
CDS
TTGGCGCTAGTAATCCACTACACCCGCAACGAAGACGGCACATTTGACGTTAAACGTTATCGCGATAATCCGATGAACTTCGTCGTGAACCATGTTCCGGACGGGGTTCCGGTGCGTGTTTTCATTGACGAAATCGGAGAAGATAACGACGTAACAGAAGACTTCGAAGCACTGAAAGAAAACGCGACTTTCCACATTGTGGAATCTGCCGGTGGTGGCGCTATTAAAGGCGTCATGAAGATTTTTAGCGTTATTCTTAAACCGTTGGCGAAGCTCTTGTCGCCGTCCGTGAAAGGTGCGACCTCTAACCTTGCGAACTCGCAGGCAGATTCCCCAAACAACAGTCTTACTGACCGCAACAACAAGGCGCGTCCGTACGAGCGCAGCTACGATATCTGCGGGACGGTGCAAACCATCCCCAATAACCTTATGACTACTTACAAGGTGTTTAACGCCGCCGGTAAAATTGTAGAGTACGGTTATTACGACGCCGGTCGCGGCTACCTCGACATCCACCCTGAAGGTATAACTGACGGGGACACCCGCGTATCAGACATAACAGGTACGTCGGTTGCCGTGTATGCCCCGTACACATCACCCAATAACACATCTACACCCCAGGTCATGGTAGGGGACCCCATAGAGCAGGGCCTGTACATCACCGTAGAATCTAACGAAGTCGACGGTGTGGTTCTTAAAGCACCCAACGGTCTGGGTATTTCTTTCTCTTACATGTCCGGGTATCCGTCTTTGTCCGGGAACATCGGCACGATATATGACCCAACAGGTGGTTCGGATTTTTCTGGAGTGTTGGTGCCTAATGACACGTTTTCGTTGGTGTCAGCGTGGACAAATACGGACGTCGACTTGTCCGGCGGCGGGTATCAGGTGTTAAGCGTATCCGAAGGGACCGTTACCTTTATCGTGCCTGGCGGCCTTATCGGGCGGTGGCAAGAAATAAGACCCGGTTCATTTTTCCGCGGTGACGGGGAAGCGTCGCTGCAACCTGATAACACGTACGAGAAAACATTAACCGATTGGGTGTCTATAAACCGCACCGAGGTCGAGCGTATAGTTGCCAATATCGCCGCCGCGAACGGCATGTATAAAGACAACGGCAAGTCAAAAACACTGGCATCCGTTACCGCTGAGATACAGTACCAGCTACTTGATGAAAATAGCACCCCTTATGGGCCGATATACACTGCACAAGGAACCGTGTCCGGGCGAACCCCAGACTACAACGGTGTCACTATTTACGCCGACCTGCCGGTTGTGTCGCGGGTGCGGGTGCGCGCCAGAAGGGTGACAGACCTCGACTTTAATTTCGAGGGGTCTGTAGTTGATGAGATAACGTACGTTAACTTGTACGGGCAAACACGCGATAACACTCCGCACTACGGCAACAGAACTACTGTACACTCGATGCGCAAGCAGACACCGCGTGCTGCAGAAGTTAAGCAACCACAGTTGCGCATGATTGCGACCGAAATGGTATACAAATACCTTGGTAACGGTGTTTTCGAAGATACGATGACCCCCAATACCCAGGCCGTGCAATCTCTTATCCGCCTGGCACGTGACCCGGACGTGGGTGGTTTAAACCTGACGGTACGCAACATGGATAAGTTACTTGCCGTGCAGAACGAGGTCGAAGCGTATTTCGGTGACAAACAGGCGGGGGAGTTTTGCTACACGTTTGATGACTATAAAACCACCATGCAGGACATAGTTAGTACTATAGCAGACGCCATATTCTGCACCCCGTATCGGCGTGGGGCGGATATCCTTCTCGATTTTGAGCGCCCTCGCATGGGCCCCGAGATGGTGTTCACCCACCGAAGCAAGGCCGGTACTTCTGAAAAGTGGACCAGAACCTTTAACGATGCTCAGGTTTTTGACAGCCTTAAATTCTCGTACATAGACCCTAAGACGAACGTCAAAGAGACTATAACCATACCCGAAACCGGGGGCCTTAAAACGGAGACTTACGACTCAAAAGGAATCCGCAACTATAAGCAGGCTTTCTGGGCGGCAAACCGTCGCCACCAGAAGAACATTTTAAAGAAAATTTCAGTGTCGTTTACCGCCACGGAAGAGGGTATCTTTGCTTTACCAAATCGTGCCATTAGTGTCGTTAAGGGCTCACGTATGGCTACCTACGATGGCTACATAACCGCAGTAAACGGCCTCACCGTAGAGCTTTCGCAGCCAGTTAAGTTCACCTCCGGGGATGACCATTCTTTGGTTCTTAAGCTGAGAGATGGCGGCGTCCAAAGTGTTCGCGTTGTCCCTGGTGCACACGACCGACAAGTAATTATGACTTCTGTACCGCAGGAAGCCATTTACACGGGTAATAGCGCCCTGAAAACTGAATTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACGGTAGACCCTGGCGATGACAGAACAGTCAAAATAACCGGGTTTAACTATGACAAGGATTTCTATAAGTTTGACAACGTGCCTCCTTTCGGTCGTGCGTTCTCTAACGGATTCGATAACGGTTTTAACTAA

Tertiary structure

PDB ID
e1d4a6f2b4d3404fff1201691116c458069ac5ba759af0dc874e195776e5fa7d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2465
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential Olsen,N.S., Hendriksen,N.B., Hansen,L.H. and Kot,W. 2020 — GenBank