Protein

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Genbank accession
QQM14247.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,61
Protein sequence
MAIDNGNYIANMNINIPAPTDPRYEGADQIKAVKRMVQASFPNINGEVTATVSELNKMTDGTQGRFIGETTMFQGLIEDIPVGWVLSDGTIQNGFQTVDLRDKFIMGYNDLKDTAQPNRSTGGENNPDLSTHLVSEEHTLILAEIPAHKHPLEYNATGSGGGGTGPDVKGGSGAETEEVGGGKPHKHGLTAKVDNGGVPTFDNRPEYVVLAFIVYVGRAA
Physico‐chemical
properties
protein length:220 AA
molecular weight: 23438,79520 Da
isoelectric point:4,89755
aromaticity:0,06364
hydropathy:-0,42136

Domains

Domains [InterPro]
SSF88874
65–214
SSF88874
QQM14247.1
1 220
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VpJYP1
[NCBI] 		2796515 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQM14247.1 [NCBI]
Genbank nucleotide accession
MW217515.1 [NCBI]
CDS location
range 2514 -> 3176
strand -
CDS
ATGGCAATTGATAATGGTAATTACATTGCAAATATGAATATCAATATCCCTGCTCCGACAGACCCTCGTTATGAGGGTGCTGACCAAATTAAAGCAGTTAAGCGTATGGTGCAAGCATCATTCCCAAATATTAATGGCGAGGTTACTGCTACAGTATCTGAACTAAACAAGATGACTGATGGTACACAAGGACGTTTCATTGGTGAGACTACCATGTTCCAAGGTCTGATTGAGGACATCCCAGTTGGTTGGGTACTATCTGATGGCACTATCCAGAATGGTTTCCAGACTGTAGATTTACGTGATAAGTTTATCATGGGTTATAATGACCTTAAAGATACAGCTCAACCTAACCGTTCAACTGGCGGTGAGAACAACCCTGACTTATCAACACACTTGGTTTCAGAAGAACATACTCTTATTCTAGCAGAGATTCCGGCTCACAAACACCCATTAGAATATAATGCAACAGGTTCTGGTGGTGGTGGTACTGGTCCAGATGTTAAAGGTGGTTCTGGTGCTGAGACTGAAGAAGTAGGTGGGGGTAAGCCACACAAGCACGGACTGACAGCAAAAGTTGATAACGGAGGCGTACCAACATTTGATAACCGACCAGAGTACGTTGTGCTAGCATTCATTGTATACGTTGGTCGAGCAGCATAA

Tertiary structure

PDB ID
ec9e726bc299855aecf3ec5b31ec36e1ddf246f2d56d1ea727a4f15d983e322b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6512
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of a Vibrio parahaemolyticus bacteriophage VpJYP1 Jiang,Y., Li,F., Qu,M., Wang,L., Tan,Z. and Yao,L. 2005-02 — GenBank