Protein

View in Explore
Genbank accession
QIG66001.1 [GenBank]
Protein name
putative glycosylase
RBP type
TF
Evidence RBPdetect
Probability 0,52
TF
Evidence Phold
Probability 1,00
Protein sequence
MVNKNLLNATFQNNPSILSGYRNKIINGDFGIWQRGTTFSSSGYTADRWGLSLNGSPVSTASVSRQAFPMGDASIPGNTESYWRLNITSGGDATYGFVGAYHLIENVRNLANTKVTLTFYARADVAGKKVGIGNPQSFGSTGDPRVDRHIGIATLDTSWKKFQFVWTVNSITGKTRGGGNDWVGIEYYFSAGTNYDARSGGIGIQTGIIDIARVSLVEGDASNEFDPFSPRHYQQELALCQRYCCVVKTGIQISASGFGLSYFYFPVQMRATPTYTTLNTGYINNATSQTVGDITVTGGYIQIQATAANGYITGWYGLFTAD
Physico‐chemical
properties
protein length:322 AA
molecular weight: 34897,41600 Da
isoelectric point:8,63562
aromaticity:0,12733
hydropathy:-0,20745

Domains

Domains [InterPro]
IPR008979
25–218
IPR008979
G3DSA:2.60.120.260
45–198
G3DSA:2.60.120.260
QIG66001.1
1 322
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Ochrobactrum phage vB_OspM_OC
[NCBI] 		2712956 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG66001.1 [NCBI]
Genbank nucleotide accession
MT028491 [NCBI]
CDS location
range 195155 -> 196123
strand +
CDS
ATGGTTAATAAAAATTTATTAAATGCTACATTTCAAAATAATCCTTCTATACTAAGTGGTTACAGAAACAAGATTATCAATGGTGATTTCGGTATTTGGCAAAGAGGAACTACGTTTTCTTCATCTGGATATACGGCTGATAGATGGGGCTTGTCTCTAAATGGTAGCCCTGTTTCCACTGCTTCTGTAAGCCGTCAAGCGTTTCCAATGGGTGACGCTTCGATACCGGGAAATACAGAAAGTTATTGGAGACTAAACATAACCAGTGGTGGCGATGCTACCTATGGCTTTGTTGGTGCTTATCACCTAATTGAGAATGTAAGAAATCTAGCTAATACCAAAGTAACCCTAACATTCTATGCTAGAGCCGATGTTGCGGGAAAGAAAGTTGGAATTGGTAATCCACAGAGCTTTGGTTCTACTGGTGATCCAAGAGTTGATAGACATATCGGAATAGCAACTCTTGATACTTCGTGGAAGAAATTTCAATTTGTCTGGACCGTTAATTCTATTACTGGAAAAACTCGCGGCGGTGGAAATGATTGGGTTGGTATTGAATACTATTTTTCTGCCGGAACCAATTATGATGCTAGATCGGGTGGAATTGGTATTCAAACAGGTATTATTGATATTGCTCGCGTTTCTCTTGTAGAAGGTGATGCTTCTAATGAATTTGATCCATTTTCACCAAGGCATTATCAACAAGAATTAGCACTTTGTCAGAGATATTGCTGTGTTGTTAAAACCGGTATTCAAATTTCAGCATCTGGATTTGGTCTTTCATATTTCTATTTTCCAGTACAAATGCGAGCAACACCAACTTATACCACATTAAATACCGGTTATATAAATAATGCCACTTCACAAACAGTTGGTGATATTACAGTTACAGGTGGATATATTCAAATTCAAGCAACAGCCGCTAATGGTTATATAACAGGTTGGTATGGCTTGTTTACAGCCGATTAA

Tertiary structure

PDB ID
81e4e6f9f157157c278b35d19faa8419c586f3be1ea68d86881e8bf9b5ff3a35
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9063
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and Characterization of First Virulent Phages, Including a Novel Jumbo Virus, Infecting Ochrobactrum spp. Decewicz,P., Golec,P., Szymczak,M., Radlinska,M. and Dziewit,L. 2020-03-18 — GenBank