Protein

View in Explore
Genbank accession
UZN24616 [GenBank]
Protein name
Dep108.2
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TSP
Evidence DepoCatalog
Probability 1,00
Protein sequence
MALQKITAPSGPVLGSVNMEAYAVSSTTKDNTQAITEAVEAARATGYPLIGWGTYAYSTALNLAGVSIRGLTLRSLGTSSASKAINVNNTNLSNVTVIGGYLNHIGGDLVTEDLTVQNSQVPTAAVWSRNRTSSGKLELRNTTLTGGNYGVLVAGDSGSALTSIYIDGLHATNLRGDGVELNLIQSVVGGWTVRNVYIDGVVGTGTANDFWGIGVGVAGATGYNPEAADELYARGGVLENINVKNCRQPIHLEKAKNFVVRNCDVWPTNAVNASSGLVPCGVSLVGCTDFVVDGITGEPNVVASVPMITTSWGVVSGAYKGPCRNYSVRNVNTTGQIRLYSGATSTIESYVALYDCKSGAGSFYKGYCSELRLENWRTSGLVLQIAHTSGEGVGTMTRNYGIKAYVVGVTSLSSAGVPDGSCSAFYVDELVTSNCNFSVRKQALGTGNRGSLVQQVQQHYLAPSTTFPRGQYFPAPSIVYRSDGLGMWIVTSSGWWVDAADAVKATVVGQTYLEANTGALNWASVNTKSAGMPISIAGAGAGGSALVTRVVRAPYVVRGVCRIDIADPVVTATADGTSISCPSPLTKIDITY
Physico‐chemical
properties
protein length:592 AA
molecular weight: 61741,73920 Da
isoelectric point:7,46878
aromaticity:0,07601
hydropathy:0,07770

Domains

Domains [InterPro]
IPR011050
7–335
IPR011050
UZN24616
1 592
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phageKPPK108.2
[NCBI] 		940415263 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UZN24616 [NCBI]
Genbank nucleotide accession
UZN24616.1 [NCBI]
CDS location
range 41800 -> 43578
strand +
CDS
ATGGCACTTCAAAAAATCACAGCTCCTTCTGGACCTGTGCTCGGCTCTGTTAATATGGAAGCCTACGCAGTATCTTCTACTACTAAGGATAATACACAAGCTATTACGGAGGCCGTTGAGGCGGCGCGCGCCACCGGCTATCCCCTAATTGGGTGGGGTACTTACGCCTATAGTACTGCCCTTAATTTGGCCGGGGTATCTATTAGGGGGCTTACTCTACGGTCCCTGGGGACATCTTCCGCCAGTAAGGCAATTAACGTAAATAACACCAATCTGTCGAACGTAACTGTAATAGGGGGGTACTTAAACCACATCGGCGGAGATTTGGTAACAGAAGACCTTACTGTGCAGAACAGCCAGGTGCCTACTGCCGCTGTTTGGTCGCGCAACCGTACTAGCTCTGGTAAACTGGAACTGCGTAATACCACCCTAACCGGGGGGAACTACGGTGTACTTGTAGCCGGGGATTCCGGCAGTGCGCTGACTAGTATATATATTGATGGGCTGCACGCTACCAACTTACGCGGTGACGGGGTTGAGTTAAACCTAATCCAATCTGTGGTAGGGGGCTGGACAGTCCGGAACGTGTATATTGATGGTGTTGTTGGTACTGGCACAGCCAACGATTTCTGGGGTATTGGGGTAGGCGTAGCAGGTGCCACCGGATACAACCCGGAAGCAGCGGATGAATTATATGCCCGCGGGGGTGTGCTGGAGAACATCAACGTCAAAAATTGTCGCCAGCCAATCCACTTAGAGAAGGCCAAGAACTTCGTAGTGCGTAATTGTGACGTATGGCCTACTAACGCTGTTAATGCGTCATCGGGCCTAGTTCCATGTGGCGTTAGTTTGGTGGGGTGCACCGACTTCGTCGTAGACGGTATTACTGGGGAACCTAACGTCGTAGCCTCTGTGCCTATGATTACCACTAGCTGGGGTGTAGTGTCGGGCGCCTACAAAGGGCCATGCCGCAACTACAGTGTACGCAATGTTAACACCACTGGACAGATACGTCTGTACTCCGGCGCAACCAGTACTATAGAGAGCTACGTTGCGTTGTACGACTGCAAATCCGGTGCAGGTAGCTTCTACAAGGGATACTGCTCTGAGCTGCGCCTGGAGAATTGGCGGACATCCGGCCTAGTGCTCCAGATTGCGCACACCTCCGGTGAGGGCGTAGGCACCATGACTCGCAACTACGGCATTAAAGCCTACGTAGTTGGTGTAACTAGCTTATCCTCTGCAGGCGTTCCTGATGGCAGCTGCAGCGCCTTCTATGTTGATGAACTAGTAACTAGTAACTGCAACTTTAGCGTACGTAAGCAGGCTCTAGGCACAGGCAACCGCGGTAGCTTGGTTCAGCAAGTGCAACAGCACTACTTGGCCCCTTCAACTACATTCCCGCGTGGTCAGTATTTTCCGGCACCCTCTATCGTATACAGAAGCGATGGGTTGGGTATGTGGATTGTTACTAGTAGCGGTTGGTGGGTGGATGCTGCTGATGCAGTGAAAGCTACTGTAGTAGGCCAGACTTATCTAGAGGCTAATACTGGCGCCCTGAACTGGGCCAGTGTAAACACTAAGTCTGCGGGTATGCCTATTAGTATTGCCGGTGCCGGTGCTGGCGGTTCTGCTCTAGTCACCCGGGTTGTGCGTGCACCTTATGTTGTTAGGGGTGTGTGCCGCATAGACATAGCAGACCCCGTGGTTACTGCTACTGCTGATGGTACCAGTATAAGCTGCCCATCTCCGCTCACTAAGATAGATATCACTTACTAG

DepoCatalog

K-type Target
KL108
Number of Rings

14

Structural Classification
Domain Ranges
N-terminal Domain
1-15
Central Domain
16-455
C-terminal Domain
456-592
Catalytic Information
Mechanism of Action: Hydrolase
Cleaved Bond: β-Glcp-(1→4)-α-Fucp
Experimentally Tested K-types
KL108
Phage Morphotype

Podo-type

Tertiary structure

1 / 2
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
The structure of Klebsiella pneumoniae K108 capsular polysaccharide is similar to Escherichia coli colanic acid Kasimova, Anastasiya A.; Shneider, Mikhail M.; Evseev, Peter V.; Shelenkov, Andrey A.; Mikhailova, Yuliya V.; Miroshnikov, Konstantin A.; Chebotar, Igor V.; Shagin, Dmitry A. 2023-01-01 — 10.1016/j.ijbiomac.2023.125403