Protein

View in Explore
Genbank accession
QDF14644.1 [GenBank]
Protein name
Dep42
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TSP
Evidence DepoCatalog
Probability 1,00
Protein sequence
MDQDIKTVIQYPVGATEFDIPFDYLSRKFVRVSLVSDDNRRLLSNITEYRYVSKTRVKLLVETTGFDRVEIRRFTSASERIVDFSDGSVLRASDLNVSQIQSAHIAEEARDAALMAMPQDDAGNLDARNRRIVRLAPGIAGTDAVNKDQLDTTLGEAGGILSDMKDLEGEIHDYIEKFADDTALVRGVAWVYNLGSADGGETVITINKSTRTYAVPYIEVNGSRQEVGYHYSFDLETQQITLATPLKAGDFVMVMTTESQLPVETLLASSVGAASIGTATGETVEERLTRLYGHFVHPETYGAVGDGITDDRVALQRSLDVAYENALNGTGPSTVRWSGDYMVSLNPNSLGVSGELAAGRSALCIRPGVSIEGKGTVRLDPSFTGSQSGAVITNWAGPADDCSIKDIRIYGGKDVATGTGITGILILDSQRVVISDVKVLNSTAGGIYLRKGATEGLYGCSFSKVSGCTVDNAGYIGIQMERPYDNTVIGNTINRCEDNGIDVFGNVNDATVTGIAQSTLITGNNIRDVLNGVFIESCGNTNITGNYIADFRSSGVIYNRINSAANDNSLTSNVLIGASGASAGVSFKNSVGYCTVASNRIQNSDYGIRCVGGGITGLNILPNTMKNIAKTLLFVEARNNGLVKSRMSTQFYEGAQVGGIPSNTSPRGVPHRFPSRLSYIVDIQPFWATEQGTREDNFERAKGTLASITGWGSKCALYDTIVAGDTVVSLNSSSVAVGEYLEINAEVYKVTSVSATYAVVRKWTGSDYTAGDYAAVIISNPSYIIRRVQWGEQ
Physico‐chemical
properties
protein length:793 AA
molecular weight: 85100,13940 Da
isoelectric point:4,99390
aromaticity:0,07566
hydropathy:-0,12875

Domains

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage SH-KP152226
[NCBI] 		2590872 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDF14644.1 [NCBI]
Genbank nucleotide accession
MK903728.1 [NCBI]
CDS location
range 33566 -> 35947
strand +
CDS
ATGGACCAAGACATTAAAACAGTCATTCAGTACCCAGTAGGGGCCACTGAGTTCGACATCCCGTTCGACTACCTGTCCCGTAAGTTTGTCCGTGTGTCGCTGGTGTCAGACGATAACCGCAGACTGCTAAGTAACATCACTGAGTACCGCTACGTGTCTAAGACCAGAGTGAAGCTCCTTGTGGAAACTACCGGGTTCGACCGTGTGGAAATCCGCAGGTTCACCTCGGCGTCTGAGCGAATCGTTGACTTCAGCGATGGCTCGGTTCTCCGCGCTTCTGACCTTAACGTATCTCAAATACAGTCGGCGCATATCGCAGAGGAAGCACGTGACGCGGCACTCATGGCCATGCCACAGGATGACGCTGGGAACCTTGATGCGCGCAACCGTAGAATCGTAAGGTTGGCACCGGGTATTGCCGGGACGGATGCAGTGAACAAGGACCAGCTTGACACGACCTTAGGAGAGGCTGGTGGTATCCTATCGGACATGAAGGACCTAGAGGGTGAGATTCATGACTACATCGAGAAGTTTGCAGATGACACTGCGCTTGTGCGTGGGGTGGCGTGGGTGTATAACCTTGGTTCCGCTGATGGTGGGGAAACCGTTATCACCATAAATAAATCGACACGTACATACGCTGTGCCTTACATTGAGGTAAATGGCTCACGCCAAGAGGTCGGGTATCACTATTCGTTCGATCTGGAAACACAGCAGATAACCCTTGCCACCCCATTGAAAGCTGGCGACTTCGTTATGGTAATGACCACAGAGTCTCAGCTCCCGGTAGAGACATTGCTGGCATCTAGCGTTGGTGCCGCGAGCATCGGGACGGCCACAGGAGAGACAGTTGAGGAGCGACTTACTCGACTTTACGGGCACTTTGTGCACCCTGAGACGTATGGTGCTGTAGGTGATGGCATAACAGACGACCGAGTTGCACTCCAGCGCTCACTAGATGTGGCTTATGAGAATGCGCTGAATGGTACTGGCCCGTCGACTGTACGCTGGTCAGGAGACTACATGGTGTCGCTGAACCCTAACTCATTAGGCGTTTCTGGGGAACTGGCAGCAGGCCGCTCAGCACTATGTATCCGACCCGGTGTGTCAATTGAAGGTAAGGGCACGGTCCGTCTTGACCCATCCTTTACAGGAAGCCAGTCTGGCGCAGTAATAACCAACTGGGCTGGTCCAGCTGACGACTGCTCCATTAAGGATATACGGATTTACGGCGGTAAGGACGTAGCCACTGGTACTGGCATAACCGGAATCCTTATTCTGGATTCACAGAGAGTAGTCATATCTGACGTTAAGGTTCTGAACAGTACAGCTGGTGGTATCTATCTGAGAAAAGGTGCCACAGAGGGTCTGTATGGATGCTCATTCAGCAAGGTCTCAGGGTGTACTGTGGATAACGCTGGGTACATTGGAATCCAGATGGAGAGACCATACGATAATACCGTCATTGGAAACACAATCAATCGGTGTGAAGATAACGGCATTGACGTGTTCGGTAACGTAAACGATGCTACGGTAACGGGCATTGCGCAATCCACGCTAATCACTGGCAACAACATAAGGGATGTCCTAAACGGAGTGTTCATTGAATCCTGCGGCAACACAAACATTACCGGAAACTACATCGCGGACTTTCGCTCCAGCGGGGTCATCTACAACCGCATCAACTCGGCGGCAAATGATAACTCACTCACCTCAAACGTACTCATCGGCGCCTCAGGTGCTTCGGCAGGTGTTAGCTTCAAGAACTCAGTAGGATACTGTACAGTGGCGAGCAACAGGATTCAGAATAGTGACTACGGGATTCGATGCGTTGGCGGAGGCATTACCGGGCTTAACATCCTCCCAAATACGATGAAGAACATCGCTAAGACCCTGCTGTTTGTGGAGGCCCGTAACAACGGTCTGGTCAAGTCACGTATGTCTACCCAGTTCTACGAGGGGGCACAGGTCGGCGGGATTCCGAGTAACACCTCTCCAAGAGGAGTACCGCACAGATTCCCATCAAGGCTCTCTTATATTGTGGATATCCAACCGTTCTGGGCAACAGAGCAGGGTACCCGCGAGGATAACTTCGAGAGAGCAAAAGGGACCTTGGCGTCAATCACTGGGTGGGGTTCAAAGTGTGCCCTGTATGACACGATTGTGGCAGGTGATACGGTGGTGTCTCTTAACTCATCGTCAGTAGCTGTGGGCGAATACCTTGAGATTAACGCGGAGGTTTATAAGGTTACTAGCGTATCCGCAACTTACGCCGTGGTTCGAAAATGGACTGGTTCGGATTACACGGCTGGAGACTACGCAGCGGTAATTATTAGTAATCCATCCTACATCATTCGCCGGGTGCAGTGGGGCGAACAGTAA

DepoCatalog

K-type Target
K47
Number of Rings

13

Structural Classification
Domain Ranges
N-terminal Domain
1-294
Central Domain
295-697
C-terminal Domain
698-793
Experimentally Tested K-types
K2
K3
K10
K38
K47
K54
K64
KL102
Phage Morphotype

Podo-type

Tertiary structure

1 / 2
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
A Novel Polysaccharide Depolymerase Encoded by the Phage SH-KP152226 Confers Specific Activity Against Multidrug-Resistant Klebsiella pneumoniae via Biofilm Degradation Wu, Yunqiang; Wang, Rui; Xu, Mengsha; Liu, Yanan; Zhu, Xianchao; Qiu, Jiangfeng; Liu, Qiming; He, Ping; Li, Qingtian 2019-01-01 — 10.3389/fmicb.2019.02768